RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 TEAD3Q99594 435 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 MAN2C1Q9NTJ4 1040 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 POLHQ9Y253 713 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 PIAS3Q9Y6X2 628 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 NBASA2RRP1 2371 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 ATP6V1G2-DDX39BF2Z307 99 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 RECKO95980 971 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 PITPNBP48739 271 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 PCBP4P57723 403 aaKnown RBP11.05□□□□□ -0.64
USP1-201ENST00000339950 ZNF33BQ06732 778 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 NKPD1Q17RQ9 610 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 EIPR1Q53HC9 387 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 OLFML2AQ68BL7 652 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 MEPCEQ7L2J0 689 aaKnown RBP11.05□□□□□ -0.64
USP1-201ENST00000339950 FAM46BQ96A09 425 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 GTPBP2Q9BX10 602 aaKnown RBP11.05□□□□□ -0.64
USP1-201ENST00000339950 TAS2R10Q9NYW0 307 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 PHF11Q9UIL8 331 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 ASB4Q9Y574 426 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 A3GALT2U3KPV4 340 aa11.05□□□□□ -0.64
USP1-201ENST00000339950 ROS1P08922 2347 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 IRGMA1A4Y4 181 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 APBB3O95704 486 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 EGFP01133 1207 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 HNRNPA1P09651 372 aaKnown RBP eCLIP11.04□□□□□ -0.64
USP1-201ENST00000339950 CT62P0C5K7 136 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 MLLT3P42568 568 aaPredicted RBP11.04□□□□□ -0.64
USP1-201ENST00000339950 SFXN4Q6P4A7 337 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 ZNF620Q6ZNG0 422 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 GDPGP1Q6ZNW5 385 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 ZNF527Q8NB42 609 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 ST8SIA2Q92186 375 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 UPRTQ96BW1 309 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 HHIPL1Q96JK4 782 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 SNX18Q96RF0 628 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 SLA2Q9H6Q3 261 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 METTL17Q9H7H0 456 aaPredicted RBP11.04□□□□□ -0.64
USP1-201ENST00000339950 RBFOX1Q9NWB1 397 aaKnown RBP11.04□□□□□ -0.64
USP1-201ENST00000339950 ASB6Q9NWX5 421 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 ICE1Q9Y2F5 2266 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 CIB4A0PJX0 185 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 CLDN4O14493 209 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 ALDOBP05062 364 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 HIST1H1CP16403 213 aaKnown RBP11.04□□□□□ -0.64
USP1-201ENST00000339950 F8A1P23610 371 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 STAT5AP42229 794 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 EMDP50402 254 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 FUT5Q11128 374 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 FAPQ12884 760 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 TMEM196Q5HYL7 178 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 C1orf94Q6P1W5 598 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 LRFN4Q6PJG9 635 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 TMEM52Q8NDY8 209 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 OR13H1Q8NG92 308 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 GOT1L1Q8NHS2 421 aaPredicted RBP11.04□□□□□ -0.64
USP1-201ENST00000339950 RAB7BQ96AH8 199 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 Q9N2J8 555 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 POT1Q9NUX5 634 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 MAB21L2Q9Y586 359 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 RIF1Q5UIP0 2472 aaKnown RBP11.04□□□□□ -0.64
USP1-201ENST00000339950 SOX1O00570 391 aaPredicted RBP11.04□□□□□ -0.64
USP1-201ENST00000339950 XKRYO14609 159 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 GNRH1P01148 92 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 SLC6A6P31641 620 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 MNDAP41218 407 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 DEFB133Q30KQ1 61 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 C3orf38Q5JPI3 329 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 IQCF2Q8IXL9 164 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 SETD6Q8TBK2 473 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 CASTOR1Q8WTX7 329 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 METTL2AQ96IZ6 378 aaKnown RBP11.04□□□□□ -0.64
USP1-201ENST00000339950 RAB11FIP5Q9BXF6 653 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 NOX4Q9NPH5 578 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 PRTFDC1Q9NRG1 225 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 MGAT4CQ9UBM8 478 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 MYO15AQ9UKN7 3530 aa11.04□□□□□ -0.64
USP1-201ENST00000339950 A0A0A6YYD5 115 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 H2AFB2P0C5Z0 115 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 ANXA3P12429 323 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 VEGFCP49767 419 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 UBXN2BQ14CS0 331 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 TMEM69Q5SWH9 247 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 C12orf73Q69YU5 71 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 ELP2Q6IA86 826 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 ZNF770Q6IQ21 691 aaPredicted RBP11.03□□□□□ -0.64
USP1-201ENST00000339950 OR2L8Q8NGY9 312 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 RNF170Q96K19 258 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 C1QTNF2Q9BXJ5 285 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 KCNK15Q9H427 330 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 EVA1BQ9NVM1 165 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 MRPS33Q9Y291 106 aaKnown RBP11.03□□□□□ -0.64
USP1-201ENST00000339950 ST6GAL1P15907 406 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 CCKBRP32239 447 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 ADPRHP54922 357 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 ARHGAP19Q14CB8 494 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 LIN54Q6MZP7 749 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 CFAP77Q6ZQR2 320 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 MBOAT2Q6ZWT7 520 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 DPY19L4Q7Z388 723 aa11.03□□□□□ -0.64
USP1-201ENST00000339950 VN1R4Q7Z5H5 301 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms