RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 SLC7A7Q9UM01 511 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 CD63P08962 238 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 CNN3Q15417 329 aaKnown RBP12.06□□□□□ -0.48
USP47-202ENST00000339865 CATSPERGQ6ZRH7 1159 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 FCRLAQ7L513 359 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 ZDHHC16Q969W1 377 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 GPR20Q99678 358 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 HSD17B14Q9BPX1 270 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 ALG12Q9BV10 488 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 RIPK3Q9Y572 518 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 PSAT1Q9Y617 370 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 TCRBV21S2A2A0A5A6 115 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 ZNF724A8MTY0 619 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 DPP4P27487 766 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 KLHDC1Q8N7A1 406 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 NIPA2Q8N8Q9 360 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 C2CD4AQ8NCU7 369 aaPredicted RBP12.06□□□□□ -0.48
USP47-202ENST00000339865 SLC2A13Q96QE2 648 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 GKN1Q9NS71 199 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 RALYQ9UKM9 306 aaKnown RBP12.06□□□□□ -0.48
USP47-202ENST00000339865 TRAPPC2LQ9UL33 140 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 NCOR1O75376 2440 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 CRABP1P29762 137 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 AHRP35869 848 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 GMPRP36959 345 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 ZNF266Q14584 549 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 SYPL2Q5VXT5 272 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 TMEM268Q5VZI3 342 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 VAMP8Q9BV40 100 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 MCOLN1Q9GZU1 580 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 EGLN3Q9H6Z9 239 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 STEAP1Q9UHE8 339 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 UBIAD1Q9Y5Z9 338 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 KLF11O14901 512 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 ACKR3P25106 362 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 DAP3P51398 398 aaKnown RBP12.06□□□□□ -0.48
USP47-202ENST00000339865 EMP2P54851 167 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 ELLP55199 621 aaPredicted RBP12.06□□□□□ -0.48
USP47-202ENST00000339865 KIAA1024LP59773 190 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 FAM189BP81408 668 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 CRMP1Q14194 572 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 TBCEQ15813 527 aaPredicted RBP12.06□□□□□ -0.48
USP47-202ENST00000339865 CLEC1AQ8NC01 280 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 AKR1E2Q96JD6 320 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 OBP2BQ9NPH6 170 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 PIGVQ9NUD9 493 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 CACNA1SQ13698 1873 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 POLEQ07864 2286 aa12.06□□□□□ -0.48
USP47-202ENST00000339865 IL1R2P27930 398 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 MMP14P50281 582 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 GPR176Q14439 515 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 MICAQ29983 383 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 FAM26DQ5JW98 314 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 ZNF813Q6ZN06 617 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 SLC35F3Q8IY50 421 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 WFIKKN2Q8TEU8 576 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 NKX3-1Q99801 234 aaPredicted RBP12.05□□□□□ -0.48
USP47-202ENST00000339865 SEC22CQ9BRL7 303 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 ZCCHC4Q9H5U6 513 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 BARX1Q9HBU1 254 aaPredicted RBP12.05□□□□□ -0.48
USP47-202ENST00000339865 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.05□□□□□ -0.48
USP47-202ENST00000339865 ZNF728P0DKX0 622 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 HES1Q14469 280 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 GRM7Q14831 915 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 TPRG1Q6ZUI0 275 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 DPPA4Q7L190 304 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 MKXQ8IYA7 352 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 AKR7LQ8NHP1 331 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 HUS1BQ8NHY5 278 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 KCNK13Q9HB14 408 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 YKT6O15498 198 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 CACNG3O60359 315 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 HOXB2P14652 356 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 RPA2P15927 270 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 MPGP29372 298 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 CXCL9Q07325 125 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 HAGHQ16775 308 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 SIMC1Q8NDZ2 872 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 OR5L1Q8NGL2 311 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 SGPP1Q9BX95 441 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 LIN7BQ9HAP6 207 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 ISYNA1Q9NPH2 558 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 SIX4Q9UIU6 781 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 OR7C1O76099 320 aaPredicted RBP12.05□□□□□ -0.48
USP47-202ENST00000339865 SULT1A3P0DMM9 295 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 SULT1A4P0DMN0 295 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 TBPL1P62380 186 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 ACTBL2Q562R1 376 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 TMEM88Q6PEY1 159 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 KREMEN2Q8NCW0 462 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 PKMYT1Q99640 499 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 SSUH2Q9Y2M2 353 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 SHMT2P34897 504 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 CHRNEQ04844 493 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 KCNC3Q14003 757 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 THNSL2Q86YJ6 484 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 ERVMER34-1Q9H9K5 563 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 SLC6A14Q9UN76 642 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 FABP7O15540 132 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 ZNF30P17039 623 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms