RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 WT1P19544 449 aaPredicted RBP13.33□□□□□ -0.28
CBX3-201ENST00000337620 RPS5P46782 204 aaKnown RBP13.33□□□□□ -0.28
CBX3-201ENST00000337620 RRADP55042 308 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 SNAPC1Q16533 368 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 OR2T33Q8NG76 320 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 TEX12Q9BXU0 123 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 SACM1LQ9NTJ5 587 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 LRFN1Q9P244 771 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 BLOC1S6Q9UL45 172 aa13.33□□□□□ -0.28
CBX3-201ENST00000337620 MPDZO75970 2070 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 ZC3H12DA2A288 527 aaKnown RBP13.32□□□□□ -0.28
CBX3-201ENST00000337620 ANKRD33BA6NCL7 494 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 FAM47E-STBD1D6RA91 191 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 TLX2O43763 284 aaPredicted RBP13.32□□□□□ -0.28
CBX3-201ENST00000337620 CD96P40200 585 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 CASRP41180 1078 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 MLLT10P55197 1068 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 FOXF1Q12946 379 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 C1QL3Q5VWW1 255 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 SPINK14Q6IE38 97 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 RPL13AP3Q6NVV1 102 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 THSD4Q6ZMP0 1018 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 SLC46A3Q7Z3Q1 461 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 GPALPP1Q8IXQ4 340 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 FADS6Q8N9I5 356 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 PSD4Q8NDX1 1056 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 OR1J4Q8NGS1 313 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 OR4Q3Q8NH05 313 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 TAAR8Q969N4 342 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 GNRHR2Q96P88 292 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 SLC38A2Q96QD8 506 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 IFT27Q9BW83 186 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 MRPS26Q9BYN8 205 aaKnown RBP13.32□□□□□ -0.28
CBX3-201ENST00000337620 UBQLN3Q9H347 655 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 AMBNQ9NP70 447 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 NANSQ9NR45 359 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 SCN3BQ9NY72 215 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 ZNF337Q9Y3M9 751 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 MED13Q9UHV7 2174 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 ZFHX4Q86UP3 3567 aa13.32□□□□□ -0.28
CBX3-201ENST00000337620 HTR3EA5X5Y0 456 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 A8MVM7 634 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 PRKYO43930 277 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 FAM20BO75063 409 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 SNX4O95219 450 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 CLPTM1O96005 669 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 CCDC159P0C7I6 412 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 APOBEC1P41238 236 aaKnown RBP13.31□□□□□ -0.28
CBX3-201ENST00000337620 SLC9A3P48764 834 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 DNASE1L1P49184 302 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 PCYT1AP49585 367 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 CXCR4P61073 352 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 ZNF74Q16587 644 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 PLPPR5Q32ZL2 321 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 GXYLT1Q4G148 440 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 ZNF227Q86WZ6 799 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 ATP6V1C2Q8NEY4 427 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 OR8J1Q8NGP2 316 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 TRUB1Q8WWH5 349 aaKnown RBP13.31□□□□□ -0.28
CBX3-201ENST00000337620 SGCDQ92629 289 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 C1GALT1C1Q96EU7 318 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 MOGAT1Q96PD6 335 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 UTP23Q9BRU9 249 aaKnown RBP13.31□□□□□ -0.28
CBX3-201ENST00000337620 MCCC2Q9HCC0 563 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 CLN6Q9NWW5 311 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 PLA2G3Q9NZ20 509 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 SPTBN2O15020 2390 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 TRAV36DV7A0A075B6V5 113 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 A0A087WXM4 84 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 SLC34A2O95436 690 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 IGF2P01344 180 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 NUDT6P53370 316 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 SNRPGP62308 76 aaKnown RBP13.31□□□□□ -0.28
CBX3-201ENST00000337620 LTBQ06643 244 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 FHL1Q13642 323 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 TUBA3CQ13748 450 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 PGGHGQ32M88 737 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 TUBA3EQ6PEY2 450 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 ZNF540Q8NDQ6 660 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 OR5M1Q8NGP8 315 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 ZNF566Q969W8 418 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 MRGPRX4Q96LA9 322 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 SCNM1Q9BWG6 230 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 POLDIP3Q9BY77 421 aaKnown RBP13.31□□□□□ -0.28
CBX3-201ENST00000337620 PRRG3Q9BZD7 231 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 OR11A1Q9GZK7 315 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 CHRNA9Q9UGM1 479 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 TPRKBQ9Y3C4 175 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 PCDHGB6Q9Y5F9 930 aa13.31□□□□□ -0.28
CBX3-201ENST00000337620 A0A0G2JMM0 328 aa13.3□□□□□ -0.28
CBX3-201ENST00000337620 A0A1W2PPB8 328 aa13.3□□□□□ -0.28
CBX3-201ENST00000337620 A0A1W2PRS3 328 aa13.3□□□□□ -0.28
CBX3-201ENST00000337620 TRIM64A6NGJ6 449 aa13.3□□□□□ -0.28
CBX3-201ENST00000337620 KIR3DP1A8MWS1 328 aa13.3□□□□□ -0.28
CBX3-201ENST00000337620 BLOC1S5-TXNDC5H3BN57 136 aa13.3□□□□□ -0.28
CBX3-201ENST00000337620 SNPHO15079 494 aa13.3□□□□□ -0.28
CBX3-201ENST00000337620 WDPCPO95876 746 aa13.3□□□□□ -0.28
CBX3-201ENST00000337620 GPR85P60893 370 aa13.3□□□□□ -0.28
CBX3-201ENST00000337620 FOXK1P85037 733 aa13.3□□□□□ -0.28
CBX3-201ENST00000337620 PIGFQ07326 219 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms