RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 HAPLN1P10915 354 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 SDC1P18827 310 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 HOXD11P31277 338 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 XCR1P46094 333 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 STK19P49842 368 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 P2RX3P56373 397 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 AAK1Q2M2I8 961 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 RAB6CQ53S08 254 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 ACTBL2Q562R1 376 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF789Q5FWF6 425 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 UNC5DQ6UXZ4 953 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 ABHD12BQ7Z5M8 362 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 MR1Q95460 341 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 KCTD12Q96CX2 325 aaKnown RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 BPIFA2Q96DR5 249 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 BORCS6Q96GS4 357 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 CTRCQ99895 268 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 DEFB126Q9BYW3 111 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 RAB6CQ9H0N0 254 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 EXOSC3Q9NQT5 275 aaKnown RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 USP22Q9UPT9 525 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 A6NIZ1 184 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 KLF8O95600 359 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 NFYBP25208 207 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 HOXA9P31269 272 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 DAP3P51398 398 aaKnown RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 INHBCP55103 352 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 OR2B8PP59922 312 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 RAP1BP61224 184 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 LEXMQ3ZCV2 418 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 ZMAT1Q5H9K5 638 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 KANSL1Q7Z3B3 1105 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 TMEM217Q8N7C4 229 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 CLDN22Q8N7P3 220 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 ZNF596Q8TC21 504 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 MYADMQ96S97 322 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 XYLT2Q9H1B5 865 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 TAF9BQ9HBM6 251 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 HHLA2Q9UM44 414 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 ACOD1A6NK06 481 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 M0QYG6 137 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 ARNTLO00327 626 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 LAMTOR5O43504 91 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 XRCC3O43542 346 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 GASTP01350 101 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 ADPRMQ3LIE5 342 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 RPL22L1Q6P5R6 122 aaKnown RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 LIX1LQ8IVB5 337 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 TP53INP2Q8IXH6 220 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 LILRA2Q8N149 483 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 HSD17B11Q8NBQ5 300 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 ANKRD9Q96BM1 317 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 UPRTQ96BW1 309 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 INTS12Q96CB8 462 aaKnown RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 TMEM231Q9H6L2 316 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 SIDT1Q9NXL6 827 aaKnown RBP9.18□□□□□ -0.94
COL4A6-201ENST00000334504 KCMF1Q9P0J7 381 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 EMCNQ9ULC0 261 aa9.18□□□□□ -0.94
COL4A6-201ENST00000334504 TMEM221A6NGB7 291 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 LGALS8O00214 317 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 PTBP3O95758 552 aaKnown RBP9.17□□□□□ -0.94
COL4A6-201ENST00000334504 SPI1P17947 270 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 RAB35Q15286 201 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 TEAD2Q15562 447 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 TOR2AQ5JU69 321 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 ENTPD8Q5MY95 495 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 PLCXD3Q63HM9 321 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 DLK2Q6UY11 383 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 MRPL21Q7Z2W9 205 aaKnown RBP9.17□□□□□ -0.94
COL4A6-201ENST00000334504 SFXN2Q96NB2 322 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 HOXD1Q9GZZ0 328 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 MED20Q9H944 212 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 FBXO8Q9NRD0 319 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 SLC22A11Q9NSA0 550 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 J3QR89 54 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 ANXA7P20073 488 aaKnown RBP9.17□□□□□ -0.94
COL4A6-201ENST00000334504 GLO1Q04760 184 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 MSMO1Q15800 293 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 KIAA0319Q5VV43 1072 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 NLGN4YQ8NFZ3 816 aaPredicted RBP9.17□□□□□ -0.94
COL4A6-201ENST00000334504 CCDC74BQ96LY2 380 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 CMSS1Q9BQ75 279 aaKnown RBP9.17□□□□□ -0.94
COL4A6-201ENST00000334504 MVB12BQ9H7P6 319 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 MED16Q9Y2X0 877 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 KLK4Q9Y5K2 254 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 ADH1BP00325 375 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 MT-ND4LP03901 98 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 NME1P15531 152 aaKnown RBP9.17□□□□□ -0.94
COL4A6-201ENST00000334504 MAOBP27338 520 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 GPR176Q14439 515 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 NECAP1Q8NC96 275 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 LRRC15Q8TF66 581 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 GPR78Q96P69 363 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 HERPUD2Q9BSE4 406 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 TPPP3Q9BW30 176 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 GSX2Q9BZM3 304 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 OR10A5Q9H207 317 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 OR10A2Q9H208 303 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 ELOVL3Q9HB03 270 aa9.17□□□□□ -0.94
COL4A6-201ENST00000334504 NRIP3Q9NQ35 241 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms