RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TP53I11O14683 189 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 PDCD5O14737 125 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 PRAMEF2O60811 474 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 RP2O75695 350 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 SOX30O94993 753 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 PRKACAP17612 351 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 PLCXD2Q0VAA5 305 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 SWI5Q1ZZU3 235 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 WDR74Q6RFH5 385 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-201ENST00000334136 ZNF615Q8N8J6 731 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 FANK1Q8TC84 345 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 CDADC1Q9BWV3 514 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 OR51J1Q9H342 316 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 FAM60AQ9NP50 221 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 PPT2Q9UMR5 302 aa10.93□□□□□ -0.66
HDAC6-201ENST00000334136 DSCR3O14972 297 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 CTNSO60931 367 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 UGT2B10P36537 528 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 HTR3AP46098 478 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 BTN1A1Q13410 526 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 HSD17B12Q53GQ0 312 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 ZMAT1Q5H9K5 638 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 SIMC1Q8NDZ2 872 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 CASTOR1Q8WTX7 329 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 SAMD8Q96LT4 415 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 ADAD1Q96M93 576 aaKnown RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 TAAR9Q96RI9 348 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 HOXD1Q9GZZ0 328 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 TXNL4BQ9NX01 149 aaKnown RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 RASD1Q9Y272 281 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 PRKRAO75569 313 aaKnown RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 ALDOBP05062 364 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 TGM1P22735 817 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 LIM2P55344 173 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 RPS25P62851 125 aaKnown RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 EEF1A2Q05639 463 aaKnown RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 EIPR1Q53HC9 387 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 TMEM69Q5SWH9 247 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 ABHD17BQ5VST6 288 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 OLIG3Q7RTU3 272 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 SLC22A8Q8TCC7 542 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 STT3BQ8TCJ2 826 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 PHOSPHO1Q8TCT1 267 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 SPRYD4Q8WW59 207 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 DHRS1Q96LJ7 313 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 ZPBPQ9BS86 351 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 SLIRPQ9GZT3 109 aaKnown RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 LYRM4Q9HD34 91 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 LIPT1Q9Y234 373 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 TRBV2A0A0J9YWF9 115 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 C13orf42A0A1B0GVH6 325 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 RNASET2O00584 256 aaKnown RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 TOX3O15405 576 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 PRODHO43272 600 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 GATBO75879 557 aaKnown RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 IL1AP01583 271 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 CD2P06729 351 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 DBIP07108 87 aaKnown RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 IGFBP1P08833 259 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 RPL35P42766 123 aaKnown RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 PITPNBP48739 271 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 SYPL1Q16563 259 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 VWA2Q5GFL6 755 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 FAM69BQ5VUD6 431 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 SLC25A24Q6NUK1 477 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 PODNL1Q6PEZ8 512 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 PAQR6Q6TCH4 344 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 DGLUCYQ7Z3D6 616 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 WDR53Q7Z5U6 358 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 INO80EQ8NBZ0 244 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 CLEC1AQ8NC01 280 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 MNTQ99583 582 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 SLC6A13Q9NSD5 602 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 AK6Q9Y3D8 172 aaKnown RBP10.92□□□□□ -0.66
HDAC6-201ENST00000334136 MMACHCQ9Y4U1 282 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 PCDHGB1Q9Y5G3 927 aa10.92□□□□□ -0.66
HDAC6-201ENST00000334136 ETHE1O95571 254 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 PAHP00439 452 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 IGHEP01854 428 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 CD22P20273 847 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 RAB3BP20337 219 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 DNASE1L1P49184 302 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 NR0B1P51843 470 aaKnown RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 GABREP78334 506 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 MLLT11Q13015 90 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 IL11RAQ14626 422 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 SPERTQ8NA61 448 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 POGLUT1Q8NBL1 392 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 ZNF248Q8NDW4 579 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 BBS10Q8TAM1 723 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 THEM6Q8WUY1 208 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 FCAMRQ8WWV6 532 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 FKBP10Q96AY3 582 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 OR2A5Q96R48 311 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 GPER1Q99527 375 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 EGLN3Q9H6Z9 239 aa10.91□□□□□ -0.66
HDAC6-201ENST00000334136 DDX31Q9H8H2 851 aaKnown RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 RBFOX1Q9NWB1 397 aaKnown RBP10.91□□□□□ -0.66
HDAC6-201ENST00000334136 ZNF225Q9UK10 706 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms