RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 MLC1Q15049 377 aa22.48■■□□□ 1.19
SOX1-201ENST00000330949 SLC16A13Q7RTY0 426 aa22.48■■□□□ 1.19
SOX1-201ENST00000330949 HCAR1Q9BXC0 346 aa22.48■■□□□ 1.19
SOX1-201ENST00000330949 BCL2L14Q9BZR8 327 aa22.48■■□□□ 1.19
SOX1-201ENST00000330949 QRSL1Q9H0R6 528 aaKnown RBP22.48■■□□□ 1.19
SOX1-201ENST00000330949 IRAK3Q9Y616 596 aa22.48■■□□□ 1.19
SOX1-201ENST00000330949 TRHRP34981 398 aaPredicted RBP22.47■■□□□ 1.19
SOX1-201ENST00000330949 PPIAP62937 165 aaKnown RBP22.47■■□□□ 1.19
SOX1-201ENST00000330949 ACTC1P68032 377 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 ACTA1P68133 377 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 FUT5Q11128 374 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 CBFBQ13951 182 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 NDUFAF6Q330K2 333 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 FAM122BQ7Z309 247 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 OVCA2Q8WZ82 227 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 SMIM19Q96E16 107 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 PCDHB10Q9UN67 800 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 DTX4Q9Y2E6 619 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 YIPF1Q9Y548 306 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 DNAH14Q0VDD8 3507 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 ZNF879B4DU55 563 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 RTCAO00442 366 aaKnown RBP22.47■■□□□ 1.19
SOX1-201ENST00000330949 CDC42EP2O14613 210 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 PIP5K1CO60331 668 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 C1orf105O95561 183 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 RAB40ALP0C0E4 278 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 HES5Q5TA89 166 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 FCRLAQ7L513 359 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 OR2W3Q7Z3T1 314 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 RAB40AQ8WXH6 277 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 SCAMP4Q969E2 229 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 TIFAQ96CG3 184 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 OR52D1Q9H346 318 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 NIT2Q9NQR4 276 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 B4GALT6Q9UBX8 382 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 FOXJ3Q9UPW0 622 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 MYO7AQ13402 2215 aa22.47■■□□□ 1.19
SOX1-201ENST00000330949 OR14I1A6ND48 311 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 CLTBP09497 229 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 SELPP16109 830 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 HTR2AP28223 471 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 CST5P28325 142 aaPredicted RBP22.46■■□□□ 1.19
SOX1-201ENST00000330949 CD70P32970 193 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 MNDAP41218 407 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 UBE2MP61081 183 aaKnown RBP22.46■■□□□ 1.19
SOX1-201ENST00000330949 SNTB1Q13884 538 aaKnown RBP22.46■■□□□ 1.19
SOX1-201ENST00000330949 ADAT1Q9BUB4 502 aaKnown RBP22.46■■□□□ 1.19
SOX1-201ENST00000330949 TINAGL1Q9GZM7 467 aaPredicted RBP22.46■■□□□ 1.19
SOX1-201ENST00000330949 ZNF629Q9UEG4 869 aaPredicted RBP22.46■■□□□ 1.19
SOX1-201ENST00000330949 CARHSP1Q9Y2V2 147 aaKnown RBP22.46■■□□□ 1.19
SOX1-201ENST00000330949 FAM86C2PA6NEL3 165 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 IFITM5A6NNB3 132 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 TMEM127O75204 238 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 HEXAP06865 529 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 ADCYAP1P18509 176 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 S100PP25815 95 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 DPP4P27487 766 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 LUMP51884 338 aaPredicted RBP22.46■■□□□ 1.19
SOX1-201ENST00000330949 SNRPD1P62314 119 aaKnown RBP22.46■■□□□ 1.19
SOX1-201ENST00000330949 POM121L1PQ3SYA9 428 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 PRAMEF8Q5VWM4 474 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 PRAMEF7Q5VXH5 474 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 NPAS4Q8IUM7 802 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 ZFP82Q8N141 532 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 LMNTD1Q8N9Z9 388 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 ZNF764Q96H86 408 aaPredicted RBP22.46■■□□□ 1.19
SOX1-201ENST00000330949 OR51M1Q9H341 326 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 TMEM185BQ9H7F4 350 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 KLHL28Q9NXS3 571 aa22.46■■□□□ 1.19
SOX1-201ENST00000330949 GPR55Q9Y2T6 319 aaPredicted RBP22.46■■□□□ 1.19
SOX1-201ENST00000330949 OGG1O15527 345 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 ZGLP1P0C6A0 271 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 PTGFRP43088 359 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 KHDRBS2Q5VWX1 349 aaKnown RBP22.45■■□□□ 1.18
SOX1-201ENST00000330949 KRT77Q7Z794 578 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 KCNRGQ8N5I3 272 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 RXFP4Q8TDU9 374 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 TMEM255BQ8WV15 326 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 SMPDL3BQ92485 455 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 OR14A2Q96R54 314 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 FAM117AQ9C073 453 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 OR51V1Q9H2C8 321 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 ADGRL4Q9HBW9 690 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 OR10H1Q9Y4A9 318 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 CKMP06732 381 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 PDHA2P29803 388 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 RAB5BP61020 215 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 BLOC1S1P78537 153 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 C10orf91Q5T1B1 145 aa22.45■■□□□ 1.18
SOX1-201ENST00000330949 BOLLQ8N9W6 283 aaKnown RBP22.45■■□□□ 1.18
SOX1-201ENST00000330949 MRPL48Q96GC5 212 aaKnown RBP22.45■■□□□ 1.18
SOX1-201ENST00000330949 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.44■■□□□ 1.18
SOX1-201ENST00000330949 PQBP1O60828 265 aaKnown RBP22.44■■□□□ 1.18
SOX1-201ENST00000330949 LATS1O95835 1130 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 BMP7P18075 431 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 PRKAG1P54619 331 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 PPP2CBP62714 309 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 PPP2CAP67775 309 aa22.44■■□□□ 1.18
SOX1-201ENST00000330949 ELAVL2Q12926 359 aaKnown RBP22.44■■□□□ 1.18
SOX1-201ENST00000330949 ZNF345Q14585 488 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms