RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 MAFIPQ8WZ33 124 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 ARL11Q969Q4 196 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 TCTN2Q96GX1 697 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 PAAF1Q9BRP4 392 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 GPN1Q9HCN4 374 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-201ENST00000328923 SEMA3GQ9NS98 782 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 TDRD15B5MCY1 1934 aaKnown RBP10.97□□□□□ -0.65
SHMT2-201ENST00000328923 KANTRA0A1W2PQU2 76 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 TMEM129A0AVI4 362 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 A8MWP6 167 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 SCN2BO60939 215 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 UBL3O95164 117 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 SLC2A1P11166 492 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 CKBP12277 381 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 GAS1P54826 345 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 NDUFA6P56556 154 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 SELENOWP63302 87 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 TWF1Q12792 350 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 UPP1Q16831 310 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 SYT14P1Q58G82 188 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 APOOLQ6UXV4 268 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 ABHD13Q7L211 337 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 ZNF546Q86UE3 836 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 OR8J2Q8NGG1 315 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 OR8J1Q8NGP2 316 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 FOXRED1Q96CU9 486 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-201ENST00000328923 CCNL2Q96S94 520 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-201ENST00000328923 SERINC2Q96SA4 455 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 NDUFAF3Q9BU61 184 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 SPACA1Q9HBV2 294 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 TLR8Q9NR97 1041 aaKnown RBP10.97□□□□□ -0.65
SHMT2-201ENST00000328923 MOKQ9UQ07 419 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 PCDHB11Q9Y5F2 797 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 DSPPQ9NZW4 1301 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 MYO10Q9HD67 2058 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 TRAV14DV4A0A0A6YYC5 116 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 ZNF726A6NNF4 738 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 MCIDASD6RGH6 385 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 SYT5O00445 386 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 PCDH7O60245 1069 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 NFATC1O95644 943 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 PDYNP01213 254 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 VSIG10L2P0DP72 767 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 MYOGP15173 224 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 CSF2RAP15509 400 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 RPS2P15880 293 aaKnown RBP10.97□□□□□ -0.65
SHMT2-201ENST00000328923 TACR1P25103 407 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 PGFP49763 221 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 WNT3P56703 355 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 LINC00303Q3SY05 128 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 RNASE10Q5GAN6 216 aaKnown RBP10.97□□□□□ -0.65
SHMT2-201ENST00000328923 FAM69AQ5T7M9 428 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 FAM27D1Q5T7N8 215 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 TMEM244Q5VVB8 128 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 DMRTA1Q5VZB9 504 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 C12orf73Q69YU5 71 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 SFXN4Q6P4A7 337 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 CERS6Q6ZMG9 384 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 ZNF813Q6ZN06 617 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 FAM98AQ8NCA5 519 aaKnown RBP10.97□□□□□ -0.65
SHMT2-201ENST00000328923 STOML3Q8TAV4 291 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 SMAP2Q8WU79 429 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-201ENST00000328923 ZNF385AQ96PM9 386 aaKnown RBP10.97□□□□□ -0.65
SHMT2-201ENST00000328923 PARD6GQ9BYG4 376 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-201ENST00000328923 EPHX3Q9H6B9 360 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 CHRNA9Q9UGM1 479 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 NDOR1Q9UHB4 597 aa10.97□□□□□ -0.65
SHMT2-201ENST00000328923 SCN8AQ9UQD0 1980 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 A0A1W2PQH9 124 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 LILRB3O75022 631 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 F10P00742 488 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 LIMS3P0CW19 117 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 LIMS4P0CW20 117 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 DAOP14920 347 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 DGKAP23743 735 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 MAGEB1P43366 347 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 LIMS1P48059 325 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 CCR8P51685 355 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 HMGA2P52926 109 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 CACNG1Q06432 222 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 KIAA0141Q14154 515 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-201ENST00000328923 OCLNQ16625 522 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 SLC25A35Q3KQZ1 300 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 IFI44LQ53G44 452 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 PDZD11Q5EBL8 140 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 OR10K2Q6IF99 312 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 KIAA1161Q6NSJ0 714 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 FBXL22Q6P050 247 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 LPCAT3Q6P1A2 487 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 FJX1Q86VR8 437 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 THOC6Q86W42 341 aaKnown RBP10.96□□□□□ -0.65
SHMT2-201ENST00000328923 FOXRED2Q8IWF2 684 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 FAM24BQ8N5W8 94 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 BBS10Q8TAM1 723 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 IGSF8Q969P0 613 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 RAB24Q969Q5 203 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 ZNF582Q96NG8 517 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-201ENST00000328923 MTERF1Q99551 399 aaKnown RBP10.96□□□□□ -0.65
SHMT2-201ENST00000328923 ORAI3Q9BRQ5 295 aa10.96□□□□□ -0.65
SHMT2-201ENST00000328923 SEC61A2Q9H9S3 476 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms