RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 MAT1AQ00266 395 aaKnown RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 IL10RAQ13651 578 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 FAM76BQ5HYJ3 339 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 CCNJQ5T5M9 372 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 ZADH2Q8N4Q0 377 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 RAB40AQ8WXH6 277 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 MUL1Q969V5 352 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 TUBB1Q9H4B7 451 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 CPNE5Q9HCH3 593 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 FARSAQ9Y285 508 aaKnown RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 SDHBP21912 280 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 CRHBPP24387 322 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 PRSS3P35030 304 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 POU3F4P49335 361 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 P2RX1P51575 399 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 USF2Q15853 346 aaPredicted RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 EMC4Q5J8M3 183 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 TMEM236Q5W0B7 351 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 FAM111BQ6SJ93 734 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 FRMD1Q8N878 549 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 CHPT1Q8WUD6 406 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 NECAB3Q96P71 396 aaPredicted RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 PLEK2Q9NYT0 353 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 USP36Q9P275 1121 aaKnown RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 DIMT1Q9UNQ2 313 aaKnown RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 HSPB2A8KAH6 182 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 K7ESM1 405 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 DDAH2O95865 285 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 CD22P20273 847 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 DPP4P27487 766 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 SNRPGP62308 76 aaKnown RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 HSPB2Q16082 182 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 IL20RBQ6UXL0 311 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 GATA6Q92908 595 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 SNAPC3Q92966 411 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 TM7SF3Q9NS93 570 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 RGPD3A6NKT7 1758 aaPredicted RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 CDC14CA4D256 554 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 SLC16A7O60669 478 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 OR7A10O76100 309 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 TMEM225BP0DP42 221 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 BMP4P12644 408 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 CYB561P49447 251 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 MAN2A2P49641 1150 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 RNF144AP50876 292 aaPredicted RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 CYCSP99999 105 aaKnown RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 CA13Q8N1Q1 262 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 ZNF740Q8NDX6 193 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 OR5H2Q8NGV7 314 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 MSLNLQ96KJ4 702 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 LAT2Q9GZY6 243 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 A0A087WZY1 265 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 A8MV72 311 aaPredicted RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 M0R036 132 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 NME1P15531 152 aaKnown RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 GM2AP17900 193 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 ENPP1P22413 925 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 ELAVL4P26378 380 aaKnown RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 MECP2P51608 486 aaKnown RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 PPP2CBP62714 309 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 PPP2CAP67775 309 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 POU3F1Q03052 451 aaPredicted RBP10.59□□□□□ -0.71
COL4A5-201ENST00000328300 MAP4K2Q12851 820 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 SLC36A2Q495M3 483 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 SLX4IPQ5VYV7 408 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 TMED4Q7Z7H5 227 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 OR5J2Q8NH18 312 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 TTTY10Q9BZA0 68 aa10.59□□□□□ -0.71
COL4A5-201ENST00000328300 M0R233 179 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 FRS3O43559 492 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 CDNFQ49AH0 187 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 CCSMST1Q4G0I0 132 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 FUNDC1Q8IVP5 155 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 STOML3Q8TAV4 291 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 ST8SIA1Q92185 356 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 UTP4Q969X6 686 aaKnown RBP10.58□□□□□ -0.72
COL4A5-201ENST00000328300 SENP5Q96HI0 755 aaPredicted RBP10.58□□□□□ -0.72
COL4A5-201ENST00000328300 SIDT1Q9NXL6 827 aaKnown RBP10.58□□□□□ -0.72
COL4A5-201ENST00000328300 BRWD3Q6RI45 1802 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 A0A1B0GWA3 101 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 BOLA2-SMG1P6H3BVE0 249 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 MAS1P04201 325 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 NPR2P20594 1047 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 LANCL3Q6ZV70 420 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 B3GNT8Q7Z7M8 397 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 DNAJC22Q8N4W6 341 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 TMEM102Q8N9M5 508 aaPredicted RBP10.58□□□□□ -0.72
COL4A5-201ENST00000328300 TP53I13Q8NBR0 393 aaPredicted RBP10.58□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF350Q9GZX5 532 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF281Q9Y2X9 895 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 LINC01565O15544 149 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 CREBL2O60519 120 aaPredicted RBP10.58□□□□□ -0.72
COL4A5-201ENST00000328300 GRPRP30550 384 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 ADH7P40394 386 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 RPS5P46782 204 aaKnown RBP10.58□□□□□ -0.72
COL4A5-201ENST00000328300 TP53I3Q53FA7 332 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 ACTBL2Q562R1 376 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 FAM180BQ6P0A1 224 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF836Q6ZNA1 936 aa10.58□□□□□ -0.72
COL4A5-201ENST00000328300 TRMT10AQ8TBZ6 339 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms