RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 IL22RA1Q8N6P7 574 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 SLC22A8Q8TCC7 542 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 ZFAND1Q8TCF1 268 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 CNOT9Q92600 299 aaKnown RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 HGDQ93099 445 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 COQ7Q99807 217 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 FUZQ9BT04 418 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 CCDC90BQ9GZT6 254 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 EXOSC3Q9NQT5 275 aaKnown RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 PLCXD1Q9NUJ7 323 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 B3GNT2Q9NY97 397 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 TNFRSF10DQ9UBN6 386 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 TESQ9UGI8 421 aaKnown RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 IL17BQ9UHF5 180 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 KLHL21Q9UJP4 597 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 FBXL4Q9UKA2 621 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 SCDO00767 359 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 CDK2AP1O14519 115 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 AP3D1O14617 1153 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 HS6ST1O60243 411 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 FADS1O60427 444 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 OR2J2O76002 312 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 OR5F1O95221 314 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 H1F0P07305 194 aaKnown RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 SPNP16150 400 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 CD36P16671 472 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 PSMB9P28065 219 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 HLA-DMAP28067 261 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 SOX6P35712 828 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 ACAA2P42765 397 aaKnown RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 SLC15A1P46059 708 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 Q0VFX4 171 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 GANABQ14697 944 aaKnown RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 TBCEQ15813 527 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 MICAQ29983 383 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 ENTPD8Q5MY95 495 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 APOOLQ6UXV4 268 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 ZNF550Q7Z398 422 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 NUP54Q7Z3B4 507 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 CCDC190Q86UF4 302 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 ZNF440Q8IYI8 595 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 POGLUT1Q8NBL1 392 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 THAP3Q8WTV1 239 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 KIAA1143Q96AT1 154 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 RASL10BQ96S79 203 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 MCHR1Q99705 422 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 BARD1Q99728 777 aaKnown RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 FNDC11Q9BVV2 318 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 ANKRD19PQ9H560 264 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 MAN2C1Q9NTJ4 1040 aa11.67□□□□□ -0.54
DDX39A-202ENST00000324340 MRPL39Q9NYK5 338 aaKnown RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 MRPS18BQ9Y676 258 aaKnown RBP11.67□□□□□ -0.54
DDX39A-202ENST00000324340 FAM186AA6NE01 2351 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 GVINP1Q7Z2Y8 2422 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 DCDC2BA2VCK2 349 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 ADAM10O14672 748 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 AIREO43918 545 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 TMCC2O75069 709 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 ADAM11O75078 769 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 CSTAP01040 98 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 SERPINA7P05543 415 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 GKN3PP0CG01 181 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 PRG2P13727 222 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 LIFP15018 202 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 HPGDP15428 266 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 IL32P24001 234 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 ELAVL4P26378 380 aaKnown RBP11.66□□□□□ -0.54
DDX39A-202ENST00000324340 HTR2AP28223 471 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 NCS1P62166 190 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 ST3GAL3Q11203 375 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 BAMBIQ13145 260 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 SKP2Q13309 424 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 TNK1Q13470 666 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 CD226Q15762 336 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 NTRK2Q16620 822 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 EXOC3L2Q2M3D2 409 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 ZNF791Q3KP31 576 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-202ENST00000324340 TIMM50Q3ZCQ8 353 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 FAM122CQ6P4D5 195 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 FAHD1Q6P587 224 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 SNX29P2Q8IUI4 249 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 ZNF614Q8N883 585 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 GALNT11Q8NCW6 608 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 NXPE2Q96DL1 559 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 ZNF559Q9BR84 538 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 ZNF556Q9HAH1 456 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 ZBTB20Q9HC78 741 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-202ENST00000324340 PDP1Q9P0J1 537 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-202ENST00000324340 ERVK-18Q9QC07 812 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 RHCGQ9UBD6 479 aa11.66□□□□□ -0.54
DDX39A-202ENST00000324340 YARS2Q9Y2Z4 477 aaKnown RBP11.66□□□□□ -0.54
DDX39A-202ENST00000324340 KNTC1P50748 2209 aa11.65□□□□□ -0.54
DDX39A-202ENST00000324340 CPSF4LA6NMK7 179 aaKnown RBP11.65□□□□□ -0.55
DDX39A-202ENST00000324340 PTGES3LE9PB15 166 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 E9PQ18 207 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 FAAHO00519 579 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 ZNF264O43296 627 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 SEC14L5O43304 696 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 ITGA10O75578 1167 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 CYP7B1O75881 506 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms