RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 A0A0J9YY10 115 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 ZNF726A6NNF4 738 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 SURF4O15260 269 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 SCO2O43819 266 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 NID1P14543 1247 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 GRM7Q14831 915 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 GPR155Q7Z3F1 870 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 TMEM150AQ86TG1 271 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 NLGN4YQ8NFZ3 816 aaPredicted RBP13.67□□□□□ -0.22
TCOF1-201ENST00000323668 PCNPQ8WW12 178 aaKnown RBP13.67□□□□□ -0.22
TCOF1-201ENST00000323668 PDE7BQ9NP56 450 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 ZNF780AO75290 641 aaPredicted RBP13.67□□□□□ -0.22
TCOF1-201ENST00000323668 PLGP00747 810 aaPredicted RBP13.67□□□□□ -0.22
TCOF1-201ENST00000323668 NPR2P20594 1047 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 BDH1Q02338 343 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 SLC2A12Q8TD20 617 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 LMX1AQ8TE12 382 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 FBLIM1Q8WUP2 373 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 FCRL1Q96LA6 429 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 SAMD11Q96NU1 681 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 ZC3H12DA2A288 527 aaKnown RBP13.67□□□□□ -0.22
TCOF1-201ENST00000323668 SOD1P00441 154 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 C1QCP02747 245 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 CD6P30203 668 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 PBX2P40425 430 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 PLCXD2Q0VAA5 305 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 LAIR2Q6ISS4 152 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 PHYHIPQ92561 330 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 NOX4Q9NPH5 578 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 MBNL1Q9NR56 388 aaKnown RBP13.67□□□□□ -0.22
TCOF1-201ENST00000323668 CMC2Q9NRP2 79 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 FKBP14Q9NWM8 211 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 SCML1Q9UN30 329 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 ERVK-19Q9WJR5 959 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 CHST2Q9Y4C5 530 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 SPDEFO95238 335 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 OR8G3PP0DMU2 310 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 RORAP35398 523 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 SCRN3Q0VDG4 424 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 OPCMLQ14982 345 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 NIPAL3Q6P499 406 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 TCTE3Q8IZS6 198 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 PFN4Q8NHR9 129 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 PLEKHM1Q9Y4G2 1056 aa13.67□□□□□ -0.22
TCOF1-201ENST00000323668 TBX19O60806 448 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 ATP1B1P05026 303 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 HCKP08631 526 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 AKAIN1P0CW23 69 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 CCINQ13939 588 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 FOXRED2Q8IWF2 684 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 RDH10Q8IZV5 341 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 NMNAT3Q96T66 252 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 SYT4Q9H2B2 425 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 THBS1P07996 1170 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 CDK5Q00535 292 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 AIMP2Q13155 320 aaKnown RBP13.66□□□□□ -0.22
TCOF1-201ENST00000323668 TRMT12Q53H54 448 aaKnown RBP13.66□□□□□ -0.22
TCOF1-201ENST00000323668 OR2A1Q8NGT9 310 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 DAZLQ92904 295 aaKnown RBP13.66□□□□□ -0.22
TCOF1-201ENST00000323668 INTS14Q96SY0 518 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 TSNAXQ99598 290 aaKnown RBP13.66□□□□□ -0.22
TCOF1-201ENST00000323668 LMF2Q9BU23 707 aaKnown RBP13.66□□□□□ -0.22
TCOF1-201ENST00000323668 THAP10Q9P2Z0 257 aaPredicted RBP13.66□□□□□ -0.22
TCOF1-201ENST00000323668 AKR7A2O43488 359 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 RAD1O60671 282 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 CD53P19397 219 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 VEGFCP49767 419 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 SERTAD2Q14140 314 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 GLCCI1Q86VQ1 547 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 SLC38A1Q9H2H9 487 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 POLE3Q9NRF9 147 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 DUSP22Q9NRW4 184 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 ZNF878C9JN71 531 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 CD34P28906 385 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 CCR9P51686 369 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 TCTE1Q5JU00 501 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 ELP2Q6IA86 826 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 GKN2Q86XP6 184 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 TSTD1Q8NFU3 115 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 ATF6BQ99941 703 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 ALG12Q9BV10 488 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 VN1R3Q9BXE9 311 aa13.66□□□□□ -0.22
TCOF1-201ENST00000323668 TMEM72A0PK05 275 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 DCDC2BA2VCK2 349 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 CHP2O43745 196 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 LTBQ06643 244 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 IRF3Q14653 427 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 PRSS45Q7RTY3 260 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 ANKRD33Q7Z3H0 272 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 OR9A4Q8NGU2 314 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 SLC6A7Q99884 636 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 ZNF350Q9GZX5 532 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 SPHK1Q9NYA1 384 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 PARP14Q460N5 1801 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 IFNA21P01568 189 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 PRH1P02810 166 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 LIMS3P0CW19 117 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 LIMS4P0CW20 117 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 CAPZA1P52907 286 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 GK2Q14410 553 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms