RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 WDFY4Q6ZS81 3184 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 FRG2CA6NGY1 282 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 ELOA3DA6NLF2 546 aaPredicted RBP6.93□□□□□ -1.3
IFT88-201ENST00000319980 BLOC1S5-TXNDC5H3BN57 136 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 ZNF264O43296 627 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 SERPINI2O75830 405 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 IFNGP01579 166 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 HLA-DPB1P04440 258 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 SBK2P0C263 348 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 BCAP31P51572 246 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 CAV3P56539 151 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 SKP2Q13309 424 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 ELOA3BQ3SY89 546 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 ARHGAP11AQ6P4F7 1023 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 ZNF574Q6ZN55 896 aaPredicted RBP6.93□□□□□ -1.3
IFT88-201ENST00000319980 LANCL3Q6ZV70 420 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 PRSS42Q7Z5A4 293 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 C9orf40Q8IXQ3 194 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 ZNF440Q8IYI8 595 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 UBALD2Q8IYN6 164 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 C10orf53Q8N6V4 93 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 POC5Q8NA72 575 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 ATP6V1C2Q8NEY4 427 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 ELOA3Q8NG57 546 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 TIMP4Q99727 224 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 RTN4RQ9BZR6 473 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 SYNDIG1Q9H7V2 258 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 SIAEQ9HAT2 523 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 BABAM2Q9NXR7 383 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 COPS7AQ9UBW8 275 aa6.93□□□□□ -1.3
IFT88-201ENST00000319980 MRTO4Q9UKD2 239 aaKnown RBP6.93□□□□□ -1.3
IFT88-201ENST00000319980 IGHV3-20A0A0C4DH32 117 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 C17orf51A8MQB3 221 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 CASKO14936 926 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 ICOSLGO75144 302 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 PDGFBP01127 241 aaPredicted RBP6.92□□□□□ -1.3
IFT88-201ENST00000319980 IL12BP29460 328 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 EBPQ15125 230 aaKnown RBP6.92□□□□□ -1.3
IFT88-201ENST00000319980 ZNF181Q2M3W8 571 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 TBC1D25Q3MII6 688 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 FNDC7Q5VTL7 733 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 WBP2NLQ6ICG8 309 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 TMEM71Q6P5X7 295 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 CD200R1LQ6Q8B3 271 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 ZNF554Q86TJ5 538 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 KMT5CQ86Y97 462 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 SLITRK4Q8IW52 837 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 DRAXINQ8NBI3 349 aaPredicted RBP6.92□□□□□ -1.3
IFT88-201ENST00000319980 SLC38A9Q8NBW4 561 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 FAM71CQ8NEG0 241 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 ZNF563Q8TA94 476 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 ZNF524Q96C55 264 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 PRRX2Q99811 253 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 KLHDC3Q9BQ90 382 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 KATNB1Q9BVA0 655 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 ZNF768Q9H5H4 540 aaKnown RBP6.92□□□□□ -1.3
IFT88-201ENST00000319980 KLHL1Q9NR64 748 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 C14orf119Q9NWQ9 140 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 CHRNA9Q9UGM1 479 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 ICAM5Q9UMF0 924 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 IGKV1D-42A0A075B6H8 117 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 TRDV1A0A1B0GX56 115 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 CCDC182A6NF36 153 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 CD8B2A6NJW9 211 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 HCRTR2O43614 444 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 PPM1BO75688 479 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 CD8BP10966 210 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 ITPKBP27987 946 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 EPHA8P29322 1005 aaPredicted RBP6.92□□□□□ -1.3
IFT88-201ENST00000319980 FGF9P31371 208 aaPredicted RBP6.92□□□□□ -1.3
IFT88-201ENST00000319980 ADH7P40394 386 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 ETV6P41212 452 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 HCCSP53701 268 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 ACSM1Q08AH1 577 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 GALEQ14376 348 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 POMZP3Q6PJE2 187 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 ARIH2OSQ8N7S6 290 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 NLGN4YQ8NFZ3 816 aaPredicted RBP6.92□□□□□ -1.3
IFT88-201ENST00000319980 NEIL3Q8TAT5 605 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 SMPDL3BQ92485 455 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 HTRA1Q92743 480 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 ZMYND19Q96E35 227 aaPredicted RBP6.92□□□□□ -1.3
IFT88-201ENST00000319980 DNAJA3Q96EY1 480 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 DEPDC7Q96QD5 511 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 NMNAT3Q96T66 252 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 MESP1Q9BRJ9 268 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 LRFN3Q9BTN0 628 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 JAM3Q9BX67 310 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 TTTY10Q9BZA0 68 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 MARCH7Q9H992 704 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 ADGRL4Q9HBW9 690 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 ENAMQ9NRM1 1142 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 PLEKHB1Q9UF11 243 aaPredicted RBP6.92□□□□□ -1.3
IFT88-201ENST00000319980 SIRT4Q9Y6E7 314 aaPredicted RBP6.92□□□□□ -1.3
IFT88-201ENST00000319980 CACNA1EQ15878 2313 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 WDFY3Q8IZQ1 3526 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 IQCMA0A1B0GVH7 501 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 A0A1W2PQL4 384 aaPredicted RBP6.92□□□□□ -1.3
IFT88-201ENST00000319980 ISPDA4D126 451 aa6.92□□□□□ -1.3
IFT88-201ENST00000319980 E9PI62 339 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms