RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 SETD6Q8TBK2 473 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 SAP25Q8TEE9 199 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 SMPDL3BQ92485 455 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 KIAA1143Q96AT1 154 aaPredicted RBP12.74□□□□□ -0.37
VAMP2-201ENST00000316509 NUDT22Q9BRQ3 303 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 HCAR1Q9BXC0 346 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 MED20Q9H944 212 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 ABCB10Q9NRK6 738 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 WDR70Q9NW82 654 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 TOR4AQ9NXH8 423 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 MKL2Q9ULH7 1088 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 IER3IP1Q9Y5U9 82 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 RNF13O43567 381 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 PLPP2O43688 288 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 LALBAP00709 142 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 PTBP1P26599 531 aaKnown RBP eCLIP12.74□□□□□ -0.378e-9■■■■□ 22
VAMP2-201ENST00000316509 RPL4P36578 427 aaKnown RBP12.74□□□□□ -0.37
VAMP2-201ENST00000316509 PON3Q15166 354 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 CD226Q15762 336 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 ZNF74Q16587 644 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 ZNF791Q3KP31 576 aaPredicted RBP12.74□□□□□ -0.37
VAMP2-201ENST00000316509 MISPQ8IVT2 679 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 SYS1Q8N2H4 156 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 OR10H4Q8NGA5 316 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 ADOQ96SZ5 270 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 DDOQ99489 341 aa12.74□□□□□ -0.37
VAMP2-201ENST00000316509 PRMT8Q9NR22 394 aaPredicted RBP12.74□□□□□ -0.37
VAMP2-201ENST00000316509 PLEKHB1Q9UF11 243 aaPredicted RBP12.74□□□□□ -0.37
VAMP2-201ENST00000316509 IGKV1D-42A0A075B6H8 117 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 GABRPO00591 440 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 TBX1O43435 398 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 CDC40O60508 579 aaKnown RBP eCLIP12.73□□□□□ -0.37
VAMP2-201ENST00000316509 RGS9O75916 674 aaPredicted RBP12.73□□□□□ -0.37
VAMP2-201ENST00000316509 PGCP20142 388 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 SDC2P34741 201 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 CD79BP40259 229 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 DIO1P49895 249 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 ACTA2P62736 377 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 ACTG2P63267 376 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 PLCXD2Q0VAA5 305 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 NDUFAF6Q330K2 333 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 DDI2Q5TDH0 399 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 AGAP7PQ5VUJ5 663 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 MZT2AQ6P582 158 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 METAP1DQ6UB28 335 aaPredicted RBP12.73□□□□□ -0.37
VAMP2-201ENST00000316509 SLC22A16Q86VW1 577 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 C9orf40Q8IXQ3 194 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 MS4A15Q8N5U1 240 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 TMEM99Q8N816 258 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 OR5W2Q8NH69 310 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 ZNF563Q8TA94 476 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 ACOT12Q8WYK0 555 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 TM9SF2Q99805 663 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 KATNB1Q9BVA0 655 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 PPIEQ9UNP9 301 aaKnown RBP12.73□□□□□ -0.37
VAMP2-201ENST00000316509 MOKQ9UQ07 419 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 NUP210LQ5VU65 1888 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 CASKO14936 926 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 RGS5O15539 181 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 TXNDC12O95881 172 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 HIST1H1CP16403 213 aaKnown RBP12.73□□□□□ -0.37
VAMP2-201ENST00000316509 MTNR1BP49286 362 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 NR0B1P51843 470 aaKnown RBP12.73□□□□□ -0.37
VAMP2-201ENST00000316509 SLC25A1P53007 311 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 SLC16A1P53985 500 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 PPP3R1P63098 170 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 HNRNPA0Q13151 305 aaKnown RBP12.73□□□□□ -0.37
VAMP2-201ENST00000316509 EFR3AQ14156 821 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 PEAR1Q5VY43 1037 aaPredicted RBP12.73□□□□□ -0.37
VAMP2-201ENST00000316509 STEAP3Q658P3 488 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 PAMR1Q6UXH9 720 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 APOOLQ6UXV4 268 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 MARCH9Q86YJ5 346 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 HAVCR2Q8TDQ0 301 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 EDAQ92838 391 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 GAL3ST4Q96RP7 486 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 LMF1Q96S06 567 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 TIMP4Q99727 224 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 NMNAT2Q9BZQ4 307 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 SEMA4CQ9C0C4 833 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 NANSQ9NR45 359 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 ZNF229Q9UJW7 825 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 RARRES3Q9UL19 164 aa12.73□□□□□ -0.37
VAMP2-201ENST00000316509 OR6C70A6NIJ9 312 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 MCIDASD6RGH6 385 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 NDUFB5O43674 189 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 SERPINA3P01011 423 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 APOA1P02647 267 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 HNRNPCP07910 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
VAMP2-201ENST00000316509 CD14P08571 375 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 HOXD12P35452 270 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 NRG3P56975 720 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 ZNF85Q03923 595 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 PRAMEF17Q5VTA0 474 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 C1orf189Q5VU69 101 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 XKRXQ6PP77 449 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 C5orf46Q6UWT4 87 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 ZNF574Q6ZN55 896 aaPredicted RBP12.72□□□□□ -0.37
VAMP2-201ENST00000316509 COX15Q7KZN9 410 aa12.72□□□□□ -0.37
VAMP2-201ENST00000316509 VASH1Q7L8A9 365 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms