RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 SSTR4P31391 388 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 OR8G2PQ6IF36 304 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 THNSL2Q86YJ6 484 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 AQP12AQ8IXF9 295 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 NLGN4YQ8NFZ3 816 aaPredicted RBP7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 OR2T33Q8NG76 320 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 OR52E4Q8NGH9 312 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 SGMS2Q8NHU3 365 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 NUBPLQ8TB37 319 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 NSUN4Q96CB9 384 aaKnown RBP7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF799Q96GE5 643 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 BORCS6Q96GS4 357 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 TSSK6Q9BXA6 273 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 NARFLQ9H6Q4 476 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 RNF186Q9NXI6 227 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 FZD4Q9ULV1 537 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 CACNA1FO60840 1977 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 MAST1Q9Y2H9 1570 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 C1orf226A1L170 272 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 OR2W5A6NFC9 320 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 ISLRO14498 428 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 OR1F1O43749 312 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 MYOGP15173 224 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 ENPP1P22413 925 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 RIPPLY3P57055 190 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 DGKZQ13574 1117 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 KCNJ11Q14654 390 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 TXNRD1Q16881 649 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 DALRD3Q5D0E6 543 aaKnown RBP7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 CLLU1Q5K131 121 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 ABRAQ8N0Z2 381 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF781Q8N8C0 355 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 OR5AP2Q8NGF4 316 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 OR56A3Q8NH54 315 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 ADAMTS17Q8TE56 1095 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 SUSD6Q92537 303 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 DUS3LQ96G46 650 aaKnown RBP7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 HPDLQ96IR7 371 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 OR6C1Q96RD1 312 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF347Q96SE7 839 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 MMP19Q99542 508 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 OR51J1Q9H342 316 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 OR52D1Q9H346 318 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 MYOZ2Q9NPC6 264 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 ADAP2Q9NPF8 381 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 DHCR7Q9UBM7 475 aaKnown RBP7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 CSNK1G3Q9Y6M4 447 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 INO80Q9ULG1 1556 aaPredicted RBP7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 PRAMEF25A6NGN4 478 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 SHBGP04278 402 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 TPOP07202 933 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 SMPD1P17405 629 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 HINT1P49773 126 aaPredicted RBP7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 TUBP50607 506 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 SCNN1GP51170 649 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 CXADRP78310 365 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 SRSF4Q08170 494 aaKnown RBP7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 TMEM267Q0VDI3 215 aaPredicted RBP7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 PRAMEF9Q5VWM5 478 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 RHBDF2Q6PJF5 856 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 VHLLQ6RSH7 139 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF562Q6V9R5 426 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF620Q6ZNG0 422 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 TMCO2Q7Z6W1 182 aaPredicted RBP7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 ATOH7Q8N100 152 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 KCNRGQ8N5I3 272 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 DCBLD1Q8N8Z6 715 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF114Q8NC26 417 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 TARS2Q9BW92 718 aaKnown RBP7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 KCNG2Q9UJ96 466 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 GABRQQ9UN88 632 aa7.18□□□□□ -1.26
LIMCH1-201ENST00000313860 URB2Q14146 1524 aaKnown RBP7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 ATP10DQ9P241 1426 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 H7C1C5 153 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 GUSBP08236 651 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 EPHB3P54753 998 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 PIGPP57054 158 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 CTSL3PQ5NE16 218 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 MARCH8Q5T0T0 291 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 LRRTM4Q86VH4 590 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 CDH26Q8IXH8 852 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 Q8N9G6 341 aaPredicted RBP7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 OR1P1Q8NH06 330 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 OR4L1Q8NH43 312 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 OR10J5Q8NHC4 309 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 TMEM37Q8WXS4 190 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 DVL3Q92997 716 aaPredicted RBP7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 DCBLD2Q96PD2 775 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 TBX15Q96SF7 602 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 SIGMAR1Q99720 223 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 CLSTN3Q9BQT9 956 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF341Q9BYN7 854 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 FAM135BQ49AJ0 1406 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 H0YAE9 185 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 RAF1P04049 648 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 HOXB2P14652 356 aa7.17□□□□□ -1.26
LIMCH1-201ENST00000313860 HOXD9P28356 352 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms