RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 TRBV4-1A0A0J9YWV2 114 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 ZNF780AO75290 641 aaPredicted RBP12.79□□□□□ -0.36
CLCN6-201ENST00000312413 NME2P22392 152 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 MRPS34P82930 218 aaKnown RBP12.79□□□□□ -0.36
CLCN6-201ENST00000312413 RTP2Q5QGT7 225 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 CST9LP1Q5W188 147 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 RBMS3Q6XE24 437 aaKnown RBP12.79□□□□□ -0.36
CLCN6-201ENST00000312413 HORMAD2Q8N7B1 307 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 FAM213BQ8TBF2 198 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 HRASLS5Q96KN8 279 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 SYT11Q9BT88 431 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 PATZ1Q9HBE1 687 aaKnown RBP12.79□□□□□ -0.36
CLCN6-201ENST00000312413 GALNT9Q9HCQ5 603 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 CCDC85CA6NKD9 419 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 HEPACAM2A8MVW5 462 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 ADAM10O14672 748 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 LALBAP00709 142 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 CSNK1A1P48729 337 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 LRRC26Q2I0M4 334 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 MKXQ8IYA7 352 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 LGALS14Q8TCE9 139 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 FOXJ1Q92949 421 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 ZNF286AQ9HBT8 521 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 ARNT2Q9HBZ2 717 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 NRIP3Q9NQ35 241 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 SMCO4Q9NRQ5 59 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 SEMA4GQ9NTN9 838 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 C1orf123Q9NWV4 160 aa12.79□□□□□ -0.36
CLCN6-201ENST00000312413 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-201ENST00000312413 ACOD1A6NK06 481 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 IL4RP24394 825 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 HOXA11P31270 313 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-201ENST00000312413 NUDT1P36639 197 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 TLE4Q04727 773 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 MFGE8Q08431 387 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-201ENST00000312413 EBPQ15125 230 aaKnown RBP12.78□□□□□ -0.36
CLCN6-201ENST00000312413 DLK2Q6UY11 383 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 TMEM25Q86YD3 366 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 PRR22Q8IZ63 422 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 NLGN4YQ8NFZ3 816 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-201ENST00000312413 OR9K2Q8NGE7 335 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 CMSS1Q9BQ75 279 aaKnown RBP12.78□□□□□ -0.36
CLCN6-201ENST00000312413 A0A0U1RQS6 177 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 C20orf202A1L168 122 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 ATP6V1G2-DDX39BF2Z307 99 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 SULT2B1O00204 365 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 SULT1B1O43704 296 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 APLNRP35414 380 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 OPRD1P41143 372 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 SRYQ05066 204 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 OR2T11Q8NH01 316 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 ZNF583Q96ND8 569 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 PKMYT1Q99640 499 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 ANKRD19PQ9H560 264 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 SETD1AO15047 1707 aaKnown RBP12.78□□□□□ -0.36
CLCN6-201ENST00000312413 UNCXA6NJT0 531 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 PTGESO14684 152 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 FUCA1P04066 466 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 DDOSTP39656 456 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 ATP1B3P54709 279 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 FAM160A2Q8N612 972 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-201ENST00000312413 CHTF18Q8WVB6 975 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 SLC35B4Q969S0 331 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 SLC6A20Q9NP91 592 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 ACSS1Q9NUB1 689 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-201ENST00000312413 A3GALT2U3KPV4 340 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 SOCS6O14544 535 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 CLDN12P56749 244 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 WBP2NLQ6ICG8 309 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 NDUFAF7Q7L592 441 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 IL22RA1Q8N6P7 574 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 OR4Q3Q8NH05 313 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 MITD1Q8WV92 249 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 PDE4DIPQ5VU43 2346 aa12.78□□□□□ -0.36
CLCN6-201ENST00000312413 LOC102725191A0A1B0GVB3 256 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 WASH4PA8MWX3 477 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 ZNF44P15621 663 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 HTR3AP46098 478 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 SIRPAP78324 504 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 SYT6Q5T7P8 510 aaPredicted RBP12.77□□□□□ -0.36
CLCN6-201ENST00000312413 TMEM184AQ6ZMB5 413 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 SCD5Q86SK9 330 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 RNF113BQ8IZP6 322 aaKnown RBP12.77□□□□□ -0.36
CLCN6-201ENST00000312413 OR52R1Q8NGF1 315 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 PDLIM5Q96HC4 596 aaKnown RBP12.77□□□□□ -0.36
CLCN6-201ENST00000312413 UQCC2Q9BRT2 126 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 PHLPP1O60346 1717 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 BHLHE40O14503 412 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 PPP1R2P9O14990 202 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 CCR7P32248 378 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 RAB30Q15771 203 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 ZNF74Q16587 644 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 SFRP5Q5T4F7 317 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 CCNJQ5T5M9 372 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 BRICD5Q6PL45 260 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 NLRP8Q86W28 1048 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 SIAH3Q8IW03 269 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 OR56B1Q8NGI3 324 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 GHSRQ92847 366 aa12.77□□□□□ -0.36
CLCN6-201ENST00000312413 LRRC46Q96FV0 321 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms