RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 EMC3Q9P0I2 261 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF780BQ9Y6R6 833 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 OR2M5A3KFT3 312 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 GABARAPH6UMI1 98 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 CCL16O15467 120 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 B3GALNT1O75752 331 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 LAMP2P13473 410 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 SRMP19623 302 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 EPHA4P54764 986 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 SIRPAP78324 504 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 TCEA2Q15560 299 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 FAM199XQ6PEV8 388 aaPredicted RBP13.55□□□□□ -0.24
COL6A2-202ENST00000310645 SEZ6L2Q6UXD5 910 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 BAIAP2L2Q6UXY1 529 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 PAQR7Q86WK9 346 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 OR52E2Q8NGJ4 325 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 SLC25A38Q96DW6 304 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 S100A16Q96FQ6 103 aaKnown RBP13.55□□□□□ -0.24
COL6A2-202ENST00000310645 PRSS27Q9BQR3 290 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 ACTRT3Q9BYD9 372 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 SLC6A15Q9H2J7 730 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 ZDHHC4Q9NPG8 344 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 NRIP3Q9NQ35 241 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 SLC35A3Q9Y2D2 325 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 USP34Q70CQ2 3546 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 H0YC42 278 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF3P17036 446 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 CD53P19397 219 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 CST5P28325 142 aaPredicted RBP13.55□□□□□ -0.24
COL6A2-202ENST00000310645 BCL6P41182 706 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 SORDQ00796 357 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 ID2Q02363 134 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 CDK5R1Q15078 307 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 OR1Q1Q15612 314 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 DCAF12L2Q5VW00 463 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF626Q68DY1 528 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 RANBP3LQ86VV4 465 aaPredicted RBP13.55□□□□□ -0.24
COL6A2-202ENST00000310645 TCEAL4Q96EI5 215 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 MRPS24Q96EL2 167 aaKnown RBP13.55□□□□□ -0.24
COL6A2-202ENST00000310645 TNFRSF13CQ96RJ3 184 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 SYNPO2LQ9H987 977 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 WASH6PQ9NQA3 447 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 INPP5EQ9NRR6 644 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 A0A087WV48 116 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 A0A1W2PPV9 198 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 TRAPPC13A5PLN9 417 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 NDUFA2O43678 99 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 PAPLNO95428 1278 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 VSIG10L2P0DP72 767 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 RAB3AP20336 220 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 HTR2AP28223 471 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 SOX2P48431 317 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 CAP1Q01518 475 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 OR7E24Q6IFN5 339 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 TTLQ8NG68 377 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 SFXN5Q8TD22 340 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 SMIM19Q96E16 107 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 MRGPRX3Q96LB0 322 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 PELOQ9BRX2 385 aaKnown RBP13.54□□□□□ -0.24
COL6A2-202ENST00000310645 MFFQ9GZY8 342 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 TAS2R3Q9NYW6 316 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 ADAM29Q9UKF5 820 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 DNASE2O00115 360 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-202ENST00000310645 RPP14O95059 124 aaKnown RBP13.54□□□□□ -0.24
COL6A2-202ENST00000310645 CDK2P24941 298 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 HOXD10P28358 340 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 P2RX1P51575 399 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 DLX5P56178 289 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 CBFBQ13951 182 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 KRT33BQ14525 404 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 LRRN1Q6UXK5 716 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 NRSN1Q8IZ57 195 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 CLRN3Q8NCR9 226 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 DNAAF1Q8NEP3 725 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 OR5K2Q8NHB8 316 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 SPHK2Q9NRA0 654 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 OPN4Q9UHM6 478 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 PLXNA2O75051 1894 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 IGKV1-8A0A0C4DH67 115 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 FAM171A2A8MVW0 826 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 CTDSPLO15194 276 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 TMIGD3P0DMS9 266 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-202ENST00000310645 ACHEP22303 614 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 CCR2P41597 374 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF136P52737 540 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 NDUFAF6Q330K2 333 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF660Q6AZW8 331 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-202ENST00000310645 OR7G2Q8NG99 324 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 ASB12Q8WXK4 309 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF514Q96K75 400 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-202ENST00000310645 MTHFD2LQ9H903 347 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-202ENST00000310645 ADAP2Q9NPF8 381 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 FBXO34Q9NWN3 711 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF175Q9Y473 711 aa13.54□□□□□ -0.24
COL6A2-202ENST00000310645 COL4A3Q01955 1670 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 MDC1Q14676 2089 aaKnown RBP13.53□□□□□ -0.24
COL6A2-202ENST00000310645 A0A1B0GVT2 93 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 NAP1L6A6NFF2 107 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 IFITM5A6NNB3 132 aa13.53□□□□□ -0.24
COL6A2-202ENST00000310645 CLEC3AO75596 197 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms