RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 C1GALT1C1Q96EU7 318 aa20.44■□□□□ 0.86
IRF3-201ENST00000309877 MRGPRX4Q96LA9 322 aa20.44■□□□□ 0.86
IRF3-201ENST00000309877 JSRP1Q96MG2 331 aaPredicted RBP20.44■□□□□ 0.86
IRF3-201ENST00000309877 IL4I1Q96RQ9 567 aa20.44■□□□□ 0.86
IRF3-201ENST00000309877 MRPS26Q9BYN8 205 aaKnown RBP20.44■□□□□ 0.86
IRF3-201ENST00000309877 LRFN1Q9P244 771 aa20.44■□□□□ 0.86
IRF3-201ENST00000309877 TRAV36DV7A0A075B6V5 113 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 A8MVM7 634 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 SNPHO15079 494 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 WISP1O95388 367 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 F10P00742 488 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 SMIM18P0DKX4 95 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 GABRB1P18505 474 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 CD96P40200 585 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 PCYT1AP49585 367 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 CDH15P55291 814 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 DLX5P56178 289 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 SNRPGP62308 76 aaKnown RBP20.43■□□□□ 0.86
IRF3-201ENST00000309877 CSNK2BP67870 215 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 TEKQ02763 1124 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 ZNF74Q16587 644 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 PLPPR5Q32ZL2 321 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 LINC00696Q6ZRV3 163 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 SLC46A3Q7Z3Q1 461 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 CCDC103Q8IW40 242 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 LRRC17Q8N6Y2 441 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 TCEANCQ8N8B7 351 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 OR8J1Q8NGP2 316 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 NTNG2Q96CW9 530 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 TMEM41AQ96HV5 264 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 TIMMDC1Q9NPL8 285 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 NANSQ9NR45 359 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 CLN6Q9NWW5 311 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 TPRKBQ9Y3C4 175 aa20.43■□□□□ 0.86
IRF3-201ENST00000309877 A0A087WXM4 84 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 A6NL46 340 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 ZNF891A8MT65 544 aaPredicted RBP20.42■□□□□ 0.86
IRF3-201ENST00000309877 XPNPEP2O43895 674 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 FAM20BO75063 409 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 HMGN1P05114 100 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 WT1P19544 449 aaPredicted RBP20.42■□□□□ 0.86
IRF3-201ENST00000309877 RPS5P46782 204 aaKnown RBP20.42■□□□□ 0.86
IRF3-201ENST00000309877 FXYD6P3P58550 94 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 SMN1Q16637 294 aaKnown RBP20.42■□□□□ 0.86
IRF3-201ENST00000309877 PGGHGQ32M88 737 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 SLC25A53Q5H9E4 307 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 OR4Q3Q8NH05 313 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 STK35Q8TDR2 534 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 TAAR8Q969N4 342 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 POLDIP3Q9BY77 421 aaKnown RBP20.42■□□□□ 0.86
IRF3-201ENST00000309877 UBQLN3Q9H347 655 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 MCCC2Q9HCC0 563 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 CHRNA9Q9UGM1 479 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 A0A087WZY1 265 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 ETV2O00321 342 aaPredicted RBP20.42■□□□□ 0.86
IRF3-201ENST00000309877 CLPTM1O96005 669 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 SPINK2P20155 84 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 SLC6A6P31641 620 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 TUBA3CQ13748 450 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 AGAP7PQ5VUJ5 663 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 TIGD3Q6B0B8 471 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 TUBA3EQ6PEY2 450 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 C5orf46Q6UWT4 87 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 SLC43A2Q8N370 569 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 PLEKHA8Q96JA3 519 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 Q96MT0 163 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 AGAP4Q96P64 663 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 NPAS1Q99742 590 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 IFT27Q9BW83 186 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 POLHQ9Y253 713 aa20.42■□□□□ 0.86
IRF3-201ENST00000309877 ZC3H12DA2A288 527 aaKnown RBP20.41■□□□□ 0.86
IRF3-201ENST00000309877 TRIM64A6NGJ6 449 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 PTGES3LE9PB15 166 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 TLX2O43763 284 aaPredicted RBP20.41■□□□□ 0.86
IRF3-201ENST00000309877 PRKYO43930 277 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 NDUFB2O95178 105 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 HIST1H2ABP04908 130 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 TCEA1P23193 301 aaKnown RBP20.41■□□□□ 0.86
IRF3-201ENST00000309877 DNASE1L1P49184 302 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 SOX8P57073 446 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 GABARAPL2P60520 117 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 C1orf140Q5VVS0 124 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 SPINK14Q6IE38 97 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 THSD4Q6ZMP0 1018 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 HIST3H2AQ7L7L0 130 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 ZNF227Q86WZ6 799 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 LIPHQ8WWY8 451 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 FGF11Q92914 225 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 HIST1H2ACQ93077 130 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 GNRHR2Q96P88 292 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 SCNM1Q9BWG6 230 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 ENKD1Q9H0I2 346 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 BATF3Q9NR55 127 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 SERINC1Q9NRX5 453 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 GPR83Q9NYM4 423 aa20.41■□□□□ 0.86
IRF3-201ENST00000309877 SHISA8B8ZZ34 492 aa20.4■□□□□ 0.86
IRF3-201ENST00000309877 AHSA1O95433 338 aa20.4■□□□□ 0.86
IRF3-201ENST00000309877 WDPCPO95876 746 aa20.4■□□□□ 0.86
IRF3-201ENST00000309877 EIF1P41567 113 aaKnown RBP20.4■□□□□ 0.86
IRF3-201ENST00000309877 FHL1Q13642 323 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms