RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CLDN1O95832 211 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 C6orf47O95873 294 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 GASTP01350 101 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 HLA-DQB1P01920 261 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ALPPP05187 535 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 YES1P07947 543 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 CPEP16870 476 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 TCN2P20062 427 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 POU3F2P20265 443 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 GSTM3P21266 225 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 GALP22466 123 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 GTF2E2P29084 291 aaKnown RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 FGF9P31371 208 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 CHI3L1P36222 383 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 DLSTP36957 453 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 FRKP42685 505 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 CRYBB2P43320 205 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 KCNJ5P48544 419 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 SLC9A3P48764 834 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ANXA11P50995 505 aaKnown RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 NUDT6P53370 316 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 RAB25P57735 213 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 DSTNP60981 165 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 PPP1CAP62136 330 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 RPS13P62277 151 aaKnown RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 TRA2BP62995 288 aaKnown RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 PPP3R1P63098 170 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 UBE2IP63279 158 aaKnown RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 C2orf80Q0P641 193 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 TPBGQ13641 420 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ERV3-1Q14264 604 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 MLC1Q15049 377 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 CDK10Q15131 360 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 SF3B4Q15427 424 aaKnown RBP eCLIP4.5□□□□□ -1.694e-8■□□□□ 8.6
CKS1B-201ENST00000308987 MED22Q15528 200 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 GLYR1Q49A26 553 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ZFP69Q49AA0 526 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF658BQ4V348 819 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 SYTL3Q4VX76 610 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ATAD3CQ5T2N8 411 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ARMC4Q5T2S8 1044 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 PRAMEF8Q5VWM4 474 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 PRAMEF7Q5VXH5 474 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 SAXO2Q658L1 398 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 RAET1GQ6H3X3 334 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 WDR74Q6RFH5 385 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 FAM111BQ6SJ93 734 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 KLHL17Q6TDP4 642 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 CASP12Q6UXS9 341 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 CEACAM20Q6UY09 585 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ASB18Q6ZVZ8 466 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 SPATC1Q76KD6 591 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 COMMD6Q7Z4G1 85 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 GALNT10Q86SR1 603 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 TCTE3Q8IZS6 198 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 KRT78Q8N1N4 520 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ASCC1Q8N9N2 400 aaKnown RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 Q8NA96 180 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 NFKBIDQ8NI38 313 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 CAPSLQ8WWF8 208 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 AP3S1Q92572 193 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 GLYATL1Q969I3 302 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 MAL2Q969L2 176 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 SLC25A46Q96AG3 418 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ST6GAL2Q96JF0 529 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 LINC00615Q96LM1 132 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 QRFPRQ96P65 431 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 OR2M4Q96R27 311 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 OR4K3Q96R72 315 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 OR5M11Q96RB7 305 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF607Q96SK3 696 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 PKP4Q99569 1192 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 FUZQ9BT04 418 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 SPATA5L1Q9BVQ7 753 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 RIOK2Q9BVS4 552 aaKnown RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 GON7Q9BXV9 100 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 SRRQ9GZT4 340 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 NIPAL2Q9H841 368 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 NT5DC2Q9H857 520 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 PELI2Q9HAT8 420 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 AMBNQ9NP70 447 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 FGF20Q9NP95 211 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 DMRT3Q9NQL9 472 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 DIABLOQ9NR28 239 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 POLE4Q9NR33 117 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ACSS1Q9NUB1 689 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 RLIMQ9NVW2 624 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 TAS2R7Q9NYW3 318 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 AKAP7Q9P0M2 348 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 SLC23A2Q9UGH3 650 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 KLHL21Q9UJP4 597 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 SNX7Q9UNH6 387 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 KCNK6Q9Y257 313 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 CMAHPQ9Y471 501 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 V9GYH0 126 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 NUP214P35658 2090 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-201ENST00000308987 AKAP6Q13023 2319 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 ACANP16112 2415 aa4.5□□□□□ -1.69
CKS1B-201ENST00000308987 PIPSLA2A3N6 862 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms