RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 HOXD13P35453 343 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 CD96P40200 585 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ADPRHP54922 357 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TBPL1P62380 186 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 XKR7Q5GH72 579 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 OR4K17Q8NGC6 315 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 BCAS3Q9H6U6 928 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 IL17CQ9P0M4 197 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ZCWPW2A0A1B0GU75 182 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 HOXC11O43248 304 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 GSTP1P09211 210 aaKnown RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 SERPINF1P36955 418 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 GALEQ14376 348 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ZNF74Q16587 644 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 LEG1Q6P5S2 330 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TMUB2Q71RG4 321 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 PARGQ86W56 976 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ZNF808Q8N4W9 903 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 RNF148Q8N7C7 305 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 MTFMTQ96DP5 389 aaKnown RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 NOX3Q9HBY0 568 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 NRIP3Q9NQ35 241 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SPHK2Q9NRA0 654 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 C1orf105O95561 183 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 CDKN2CP42773 168 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 PRDX1Q06830 199 aaKnown RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 CLEC1AQ8NC01 280 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 GPR152Q8TDT2 470 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SH3RF2Q8TEC5 729 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 NKX3-1Q99801 234 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 TSSK6Q9BXA6 273 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 GAR1Q9NY12 217 aaKnown RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 STEAP1Q9UHE8 339 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 B3GALT5Q9Y2C3 310 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ALG1L2C9J202 215 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 DOK2O60496 412 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 H2BFMP0C1H6 154 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SLC5A2P31639 672 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 DCTDP32321 178 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 CDK3Q00526 305 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 VITQ6UXI7 678 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 PQLC3Q8N755 202 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 OR5M3Q8NGP4 307 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 OR14A2Q96R54 314 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 OCSTAMPQ9BR26 566 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SPANXCQ9NY87 97 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 PRKAB1Q9Y478 270 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 YIPF1Q9Y548 306 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 RFC3P40938 356 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 BAXQ07812 192 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 C14orf28Q4W4Y0 310 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TECPR1Q7Z6L1 1165 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 STXBP6Q8NFX7 210 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 OR6S1Q8NH40 331 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SORCS1Q8WY21 1168 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ALOXE3Q9BYJ1 711 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SLC6A20Q9NP91 592 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 PRSS16Q9NQE7 514 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 PISDQ9UG56 409 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 G3V2L1 256 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 RFXAPO00287 272 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 DDAH2O95865 285 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 PXNP49023 591 aaPredicted RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 SPANXN4Q5MJ08 99 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 CTSL3PQ5NE16 218 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 TMEM53Q6P2H8 277 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 KLHDC8AQ8IYD2 350 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 MFSD8Q8NHS3 518 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GTPBP3Q969Y2 492 aaKnown RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 SGTBQ96EQ0 304 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ALX4Q9H161 411 aaPredicted RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 SLC35E2P0CK97 266 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 MGMTP16455 207 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 HTR5AP47898 357 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 CCDC116Q8IYX3 515 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 C1orf87Q8N0U7 546 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 SALL4Q9UJQ4 1053 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 LOC100289279A0A1B0GTE1 492 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 KIR2DL3P43628 341 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 CLCNKAP51800 687 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 SGCBQ16585 318 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 OR1J1Q8NGS3 322 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 JOSD2Q8TAC2 188 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ATOH8Q96SQ7 321 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 DOK1Q99704 481 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 DPH1Q9BZG8 443 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 SLC5A7Q9GZV3 580 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 EIF5A2Q9GZV4 153 aaKnown RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 CHRNA10Q9GZZ6 450 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 HELZP42694 1942 aaKnown RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 ASCC3Q8N3C0 2202 aaKnown RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 MYBPHLA2RUH7 354 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 TMEM221A6NGB7 291 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 F5H0A9 414 aaPredicted RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 ZNF264O43296 627 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 CD82P27701 267 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 TAS2R45P59539 299 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 NHSL2Q5HYW2 709 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GPR157Q5UAW9 335 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms