RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 KCNE3Q9Y6H6 103 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 KIAA0355O15063 1070 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 GMDSO60547 372 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 ATP1B1P05026 303 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 SYN1P17600 705 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 CXCR1P25024 350 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 RPS27P42677 84 aaKnown RBP11.28□□□□□ -0.6
PDGFD-201ENST00000302251 LUMP51884 338 aaPredicted RBP11.28□□□□□ -0.6
PDGFD-201ENST00000302251 TSSK4Q6SA08 328 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 TMEM205Q6UW68 189 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 LCTLQ6UWM7 567 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 MOAP1Q96BY2 351 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 ZNF285Q96NJ3 590 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 MS4A8Q9BY19 250 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 ULBP3Q9BZM4 244 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 Q9N2J8 555 aa11.28□□□□□ -0.6
PDGFD-201ENST00000302251 TRBV5-4A0A0C4DH59 114 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 TCRBV16S1A1N1A0A5B0 115 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 PRAMEF2O60811 474 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 NDUFB2O95178 105 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 CD160O95971 181 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 F13BP05160 661 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 TPOP07202 933 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 MSL3P1P0C860 447 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 ZNF888P0CJ79 500 aaPredicted RBP11.27□□□□□ -0.6
PDGFD-201ENST00000302251 ADRB3P13945 408 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 FRKP42685 505 aaPredicted RBP11.27□□□□□ -0.6
PDGFD-201ENST00000302251 CXADRP78310 365 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 ITPRIPL2Q3MIP1 535 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 CLVS2Q5SYC1 327 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 BAIAP2L2Q6UXY1 529 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 PRSS42Q7Z5A4 293 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 ASPGQ86U10 573 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 OR52N1Q8NH53 320 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 SDHCQ99643 169 aaPredicted RBP11.27□□□□□ -0.6
PDGFD-201ENST00000302251 PLEKHA1Q9HB21 404 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 PTTG3PQ9NZH4 202 aa11.27□□□□□ -0.6
PDGFD-201ENST00000302251 KCNE1BA0A087WTH5 132 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 CCSO14618 274 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 SGCEO43556 437 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 CHAF1BQ13112 559 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.27□□□□□ -0.61
PDGFD-201ENST00000302251 DEFB110Q30KQ9 67 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 KLHDC8BQ8IXV7 354 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 C12orf45Q8N5I9 185 aaPredicted RBP11.27□□□□□ -0.61
PDGFD-201ENST00000302251 SIRT6Q8N6T7 355 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 DTD2Q96FN9 168 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 CPEB1Q9BZB8 566 aaKnown RBP11.27□□□□□ -0.61
PDGFD-201ENST00000302251 ACSS1Q9NUB1 689 aaPredicted RBP11.27□□□□□ -0.61
PDGFD-201ENST00000302251 A4GNTQ9UNA3 340 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 CAMK2AQ9UQM7 478 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 PIKFYVEQ9Y2I7 2098 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 SOX1O00570 391 aaPredicted RBP11.27□□□□□ -0.61
PDGFD-201ENST00000302251 ADAMTS4O75173 837 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 AGTR1P30556 359 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 DCTDP32321 178 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 SOX9P48436 509 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 ZNF542PQ5EBM4 170 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 SFRP5Q5T4F7 317 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 OR6V1Q8N148 313 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 OR51D1Q8NGF3 324 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 ZNF443Q9Y2A4 671 aaPredicted RBP11.27□□□□□ -0.61
PDGFD-201ENST00000302251 ATG2BQ96BY7 2078 aa11.27□□□□□ -0.61
PDGFD-201ENST00000302251 VEGFDO43915 354 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 CDC40O60508 579 aaKnown RBP eCLIP11.26□□□□□ -0.61
PDGFD-201ENST00000302251 CCR9P51686 369 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 TEKQ02763 1124 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 LTBQ06643 244 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 FGL1Q08830 312 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 ZNF616Q08AN1 781 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 ILF3Q12906 894 aaKnown RBP eCLIP11.26□□□□□ -0.61
PDGFD-201ENST00000302251 EIF2B1Q14232 305 aaKnown RBP11.26□□□□□ -0.61
PDGFD-201ENST00000302251 DHCR24Q15392 516 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 ZNF628Q5EBL2 1059 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 MBOAT2Q6ZWT7 520 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 CAMKVQ8NCB2 501 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 RAB11FIP5Q9BXF6 653 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 OR8D2Q9GZM6 311 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 GPATCH2Q9NW75 528 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 REV1Q9UBZ9 1251 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 ZNF878C9JN71 531 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 M0QYG6 137 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 GAPDHSO14556 408 aaPredicted RBP11.26□□□□□ -0.61
PDGFD-201ENST00000302251 SBK2P0C263 348 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 PPP3CBP16298 524 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 UGT2B7P16662 529 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 NRG3P56975 720 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 TNFRSF17Q02223 184 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 SMAD2Q15796 467 aaKnown RBP11.26□□□□□ -0.61
PDGFD-201ENST00000302251 GLYR1Q49A26 553 aaPredicted RBP11.26□□□□□ -0.61
PDGFD-201ENST00000302251 TMEM35AQ53FP2 167 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 PRRT3Q5FWE3 981 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 LCN10Q6JVE6 187 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 RPL13AP3Q6NVV1 102 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 C1orf94Q6P1W5 598 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 TMUB2Q71RG4 321 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 ABHD13Q7L211 337 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 AMER3Q8N944 861 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 OR4D11Q8NGI4 311 aa11.26□□□□□ -0.61
PDGFD-201ENST00000302251 DCUN1D4Q92564 292 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms