RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 EEF1A1P68104 462 aaKnown RBP15.41■□□□□ 0.06
CPSF4-201ENST00000292476 LSM11P83369 360 aaKnown RBP eCLIP15.41■□□□□ 0.063e-6■□□□□ 9.4
CPSF4-201ENST00000292476 BDH1Q02338 343 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 EIF3IQ13347 325 aaKnown RBP15.41■□□□□ 0.06
CPSF4-201ENST00000292476 GLYR1Q49A26 553 aaPredicted RBP15.41■□□□□ 0.06
CPSF4-201ENST00000292476 CT45A2Q5DJT8 189 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 ARMC4Q5T2S8 1044 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 DDI2Q5TDH0 399 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 AGAP6Q5VW22 663 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 MARCH9Q86YJ5 346 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 GID4Q8IVV7 300 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 CMIPQ8IY22 773 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 PRSS58Q8IYP2 241 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 OR8H2Q8N162 312 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 SCAIQ8N9R8 606 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 C17orf47Q8NEP4 570 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 IL17RDQ8NFM7 739 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 BRIX1Q8TDN6 353 aaKnown RBP15.41■□□□□ 0.06
CPSF4-201ENST00000292476 ZG16BQ96DA0 208 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 LCORQ96JN0 433 aaPredicted RBP15.41■□□□□ 0.06
CPSF4-201ENST00000292476 AGAP4Q96P64 663 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 FN3KQ9H479 309 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 CTPS2Q9NRF8 586 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.41■□□□□ 0.06
CPSF4-201ENST00000292476 CNIH4Q9P003 139 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 CAB39Q9Y376 341 aaPredicted RBP15.41■□□□□ 0.06
CPSF4-201ENST00000292476 A8MUA0 341 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 WWP2O00308 870 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 PLD2O14939 933 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 AKAP8O43823 692 aaKnown RBP15.41■□□□□ 0.06
CPSF4-201ENST00000292476 CLPSP04118 112 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 CFL1P23528 166 aaKnown RBP15.41■□□□□ 0.06
CPSF4-201ENST00000292476 PTBP1P26599 531 aaKnown RBP eCLIP15.41■□□□□ 0.06
CPSF4-201ENST00000292476 ZNF79Q15937 498 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 RPL13AP3Q6NVV1 102 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 ZNF544Q6NX49 715 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 ZNF836Q6ZNA1 936 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 LAX1Q8IWV1 398 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 ZNF527Q8NB42 609 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 OR2T33Q8NG76 320 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 TM9SF4Q92544 642 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 LIN37Q96GY3 246 aaPredicted RBP15.41■□□□□ 0.06
CPSF4-201ENST00000292476 CTRCQ99895 268 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 ULBP3Q9BZM4 244 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 SACM1LQ9NTJ5 587 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 ASB6Q9NWX5 421 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 ERVK13-1Q9NX77 482 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 PLEKHB1Q9UF11 243 aaPredicted RBP15.41■□□□□ 0.06
CPSF4-201ENST00000292476 C2orf92A0A1B0GVN3 265 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 TRAPPC13A5PLN9 417 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 CCL4P13236 92 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 ATP12AP54707 1039 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 SCN1BQ07699 218 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 HNRNPA0Q13151 305 aaKnown RBP15.4■□□□□ 0.06
CPSF4-201ENST00000292476 ASAH1Q13510 395 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 GPR50Q13585 617 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 ZNF141Q15928 474 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 C22orf42Q6IC83 251 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 MRPL14Q6P1L8 145 aaKnown RBP15.4■□□□□ 0.06
CPSF4-201ENST00000292476 NPSR1Q6W5P4 371 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 ANKRD37Q7Z713 158 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 HMGN2P46Q86SG4 172 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 GRAMD2AQ8IUY3 354 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 NKAIN4Q8IVV8 208 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 CACTIN-AS1Q8N1I8 211 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 KLHL36Q8N4N3 616 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 OR4Q3Q8NH05 313 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 POLHQ9Y253 713 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 CARD8Q9Y2G2 431 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 LOXL2Q9Y4K0 774 aa15.4■□□□□ 0.06
CPSF4-201ENST00000292476 CDHR4A6H8M9 788 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 AGRPO00253 132 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 FRS3O43559 492 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 TRAPPC2P0DI81 140 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 TRAPPC2BP0DI82 140 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 IL7P13232 177 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 RPS5P46782 204 aaKnown RBP15.39■□□□□ 0.05
CPSF4-201ENST00000292476 ZNF136P52737 540 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 RPS25P62851 125 aaKnown RBP15.39■□□□□ 0.05
CPSF4-201ENST00000292476 PPP3R1P63098 170 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 CRTC2Q53ET0 693 aaPredicted RBP15.39■□□□□ 0.05
CPSF4-201ENST00000292476 OR2G6Q5TZ20 316 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 METAP1DQ6UB28 335 aaPredicted RBP15.39■□□□□ 0.05
CPSF4-201ENST00000292476 NRMQ8IXM6 262 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 BCORP1Q8N888 145 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 DEPDC7Q96QD5 511 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 TAAR9Q96RI9 348 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 LPAR4Q99677 370 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 CRB3Q9BUF7 120 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 DDA1Q9BW61 102 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 TMEM5Q9Y2B1 443 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 DTX4Q9Y2E6 619 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 GPR52Q9Y2T5 361 aa15.39■□□□□ 0.05
CPSF4-201ENST00000292476 TO15178 435 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 THY1P04216 161 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 HLA-DPB1P04440 258 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 SDC2P34741 201 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 RFX3P48380 749 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 INSM1Q01101 510 aaPredicted RBP15.38■□□□□ 0.05
CPSF4-201ENST00000292476 ISXQ2M1V0 245 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms