RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 NR4A3Q92570 626 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 MS4A6EQ96DS6 147 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 SAV1Q9H4B6 383 aaPredicted RBP12.4□□□□□ -0.42
SCAF4-201ENST00000286835 PDCD5O14737 125 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 OR6A2O95222 327 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 CFDP00746 253 aaPredicted RBP12.4□□□□□ -0.42
SCAF4-201ENST00000286835 GTF2F2P13984 249 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 GJA4P35212 333 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 PCGF3Q3KNV8 242 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 SLC48A1Q6P1K1 146 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 TPRA1Q86W33 373 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 FBXL6Q8N531 539 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 ZC3HAV1LQ96H79 300 aaKnown RBP12.4□□□□□ -0.42
SCAF4-201ENST00000286835 SPACA7Q96KW9 195 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 MS4A4EQ96PG1 132 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 TPSD1Q9BZJ3 242 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 PPA2Q9H2U2 334 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 MKKSQ9NPJ1 570 aaPredicted RBP12.4□□□□□ -0.42
SCAF4-201ENST00000286835 CYP8B1Q9UNU6 501 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 FARSAQ9Y285 508 aaKnown RBP12.4□□□□□ -0.42
SCAF4-201ENST00000286835 SLC35A3Q9Y2D2 325 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 ELOA3DA6NLF2 546 aaPredicted RBP12.4□□□□□ -0.42
SCAF4-201ENST00000286835 TAGLNQ01995 201 aaKnown RBP12.4□□□□□ -0.42
SCAF4-201ENST00000286835 MESP2Q0VG99 397 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 TRAM1Q15629 374 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 ELOA3BQ3SY89 546 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 BEX5Q5H9J7 111 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 OTPQ5XKR4 325 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 THSD4Q6ZMP0 1018 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 LINC01555Q8NAE3 123 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 DNAAF1Q8NEP3 725 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 ELOA3Q8NG57 546 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 OR52B4Q8NGK2 314 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 ACSL5Q9ULC5 683 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 CA14Q9ULX7 337 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 COLEC10Q9Y6Z7 277 aa12.4□□□□□ -0.42
SCAF4-201ENST00000286835 KLHL18O94889 574 aa12.4□□□□□ -0.43
SCAF4-201ENST00000286835 NTSR1P30989 418 aa12.4□□□□□ -0.43
SCAF4-201ENST00000286835 BIKQ13323 160 aa12.4□□□□□ -0.43
SCAF4-201ENST00000286835 LIN54Q6MZP7 749 aa12.4□□□□□ -0.43
SCAF4-201ENST00000286835 NLRC3Q7RTR2 1065 aa12.4□□□□□ -0.43
SCAF4-201ENST00000286835 UBE3DQ7Z6J8 389 aa12.4□□□□□ -0.43
SCAF4-201ENST00000286835 ZNF576Q9H609 170 aa12.4□□□□□ -0.43
SCAF4-201ENST00000286835 BCL2L10Q9HD36 194 aa12.4□□□□□ -0.43
SCAF4-201ENST00000286835 MED17Q9NVC6 651 aa12.4□□□□□ -0.43
SCAF4-201ENST00000286835 TCRBV21S2A2A0A5A6 115 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 URADA6NGE7 173 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 SYT5O00445 386 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 GMDSO60547 372 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 RBBP9O75884 186 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 PTBP1P26599 531 aaKnown RBP eCLIP12.39□□□□□ -0.437e-6■□□□□ 8.1
SCAF4-201ENST00000286835 ACTC1P68032 377 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 ACTA1P68133 377 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 ARHGAP19Q14CB8 494 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 PLA1AQ53H76 456 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 YOD1Q5VVQ6 348 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-201ENST00000286835 LRRN1Q6UXK5 716 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 BTN2A1Q7KYR7 527 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 BPHLQ86WA6 291 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-201ENST00000286835 SFTPA1Q8IWL2 248 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 CMTM4Q8IZR5 234 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 FAM181AQ8N9Y4 354 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 WDR34Q96EX3 536 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 FOXN4Q96NZ1 517 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 NKX3-1Q99801 234 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-201ENST00000286835 RSPO3Q9BXY4 272 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-201ENST00000286835 EPHX3Q9H6B9 360 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 STARD5Q9NSY2 213 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 POT1Q9NUX5 634 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 SDHAF2Q9NX18 166 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 GXYLT2A0PJZ3 443 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 P2RY2P41231 377 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 ERVK-25P63136 954 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 SHC2P98077 582 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 C1orf61Q13536 156 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 OR5M10Q6IEU7 315 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 NR2C2APQ86WQ0 139 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 SLC35F2Q8IXU6 374 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 CFHR5Q9BXR6 569 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 MS4A7Q9GZW8 240 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-201ENST00000286835 MBNL1Q9NR56 388 aaKnown RBP12.39□□□□□ -0.43
SCAF4-201ENST00000286835 DLL4Q9NR61 685 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 TAS2R3Q9NYW6 316 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 ADAM18Q9Y3Q7 739 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 TVP23AA6NH52 213 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 B4DGG1 531 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 AGR2O95994 175 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 F3P13726 295 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 ENPP1P22413 925 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 NFYAP23511 347 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-201ENST00000286835 NRG3P56975 720 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 FBXW4P57775 412 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 DCST2Q5T1A1 773 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 ASPGQ86U10 573 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 YIPF5Q969M3 257 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 NMNAT3Q96T66 252 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 FBXL2Q9UKC9 423 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 ACAD8Q9UKU7 415 aa12.39□□□□□ -0.43
SCAF4-201ENST00000286835 SIRPAP78324 504 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 GAS6Q14393 721 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms