RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 CHRNA10Q9GZZ6 450 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 MED17Q9NVC6 651 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 LY6G6EA0A0G2JKS1 128 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 LINC00854A0A1B0GVQ3 168 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 TMEM129A0AVI4 362 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 TMEM221A6NGB7 291 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 IDSB3KWA1 339 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 M0R296 226 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 NDUFB5O43674 189 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 CDC40O60508 579 aaKnown RBP eCLIP16.41■□□□□ 0.22
CAPN1-201ENST00000279247 CPEP16870 476 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 HK1P19367 917 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 AQP2P41181 271 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 GPR143P51810 404 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 PRSS42Q7Z5A4 293 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 OR6K6Q8NGW6 343 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 OMA1Q96E52 524 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 ARHGAP9Q9BRR9 750 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 DUSP23Q9BVJ7 150 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 WWTR1Q9GZV5 400 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 SLC35A3Q9Y2D2 325 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 U3KQA8 63 aa16.41■□□□□ 0.22
CAPN1-201ENST00000279247 IGHV5-10-1A0A0J9YXX1 117 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 IRGMA1A4Y4 181 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 PSMD9O00233 223 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 SLC30A4O14863 429 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 NCR1O76036 304 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 IFI6P09912 130 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 ABCD3P28288 659 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 TACR3P29371 465 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 NKAIN1Q4KMZ8 207 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 TCEAL6Q6IPX3 200 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 GID4Q8IVV7 300 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 DNAJA4Q8WW22 397 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-201ENST00000279247 TCEAL3Q969E4 200 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 ZNF426Q9BUY5 554 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 OCIAD1Q9NX40 245 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 AHCTF1Q8WYP5 2266 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 J3QLW9 94 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 NDUFB2O95178 105 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 HEXBP07686 556 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 PEPDP12955 493 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 TDGF1P13385 188 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 ZNF19P17023 458 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 MST1P26927 711 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 ZNF117Q03924 483 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 FHL1Q13642 323 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 Q6ZNX1 250 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 COX15Q7KZN9 410 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 PARP16Q8N5Y8 322 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 ATP6V1C2Q8NEY4 427 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 KATNB1Q9BVA0 655 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 MRPS18AQ9NVS2 196 aaKnown RBP16.4■□□□□ 0.22
CAPN1-201ENST00000279247 C14orf119Q9NWQ9 140 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 FRG2CA6NGY1 282 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 RPS5P46782 204 aaKnown RBP16.4■□□□□ 0.22
CAPN1-201ENST00000279247 LIMK1P53667 647 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 SKP2Q13309 424 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 TRIM61Q5EBN2 209 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 C1QL3Q5VWW1 255 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 OTPQ5XKR4 325 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 FAM199XQ6PEV8 388 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-201ENST00000279247 ARL9Q6T311 187 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 TSSK2Q96PF2 358 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 RARRES3Q9UL19 164 aa16.4■□□□□ 0.22
CAPN1-201ENST00000279247 ZNF670-ZNF695F2Z2N8 137 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 H7C1C5 153 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 SNX4O95219 450 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 RANBP1P43487 201 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 LCN6P62502 163 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 LCN10Q6JVE6 187 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 RPL13AP3Q6NVV1 102 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 ZNF322Q6U7Q0 402 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-201ENST00000279247 OR1N1Q8NGS0 311 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 KISS1RQ969F8 398 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-201ENST00000279247 SLC25A36Q96CQ1 311 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 KTI12Q96EK9 354 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-201ENST00000279247 NANSQ9NR45 359 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 SIRT4Q9Y6E7 314 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-201ENST00000279247 IGKV1D-42A0A075B6H8 117 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 E9PI62 339 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 CD40LGP29965 261 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 RBM34P42696 430 aaKnown RBP16.39■□□□□ 0.21
CAPN1-201ENST00000279247 RUNX1T1Q06455 604 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.39■□□□□ 0.21
CAPN1-201ENST00000279247 SLC3A1Q07837 685 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 SPANXN2Q5MJ10 180 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 WBP2NLQ6ICG8 309 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 LAX1Q8IWV1 398 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 ZNRF4Q8WWF5 429 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 HTRA1Q92743 480 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 COX4I2Q96KJ9 171 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 CCDC59Q9P031 241 aaKnown RBP16.39■□□□□ 0.21
CAPN1-201ENST00000279247 ZNF229Q9UJW7 825 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 GRIP1Q9Y3R0 1128 aa16.39■□□□□ 0.21
CAPN1-201ENST00000279247 CASKO14936 926 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 ACVR1BP36896 505 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 GRK6P43250 576 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 PLEKHG7Q6ZR37 379 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 SSX6Q7RTT6 188 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms