RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 RHOFQ9HBH0 211 aa8.54□□□□□ -1.04
PDGFC-201ENST00000274071 TMEM27Q9HBJ8 222 aa8.54□□□□□ -1.04
PDGFC-201ENST00000274071 MRPL17Q9NRX2 175 aaKnown RBP8.54□□□□□ -1.04
PDGFC-201ENST00000274071 IL17BQ9UHF5 180 aa8.54□□□□□ -1.04
PDGFC-201ENST00000274071 MYO10Q9HD67 2058 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 CCDC187A0A096LP49 1063 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 A6NCN8 305 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 FAM183AA6NL82 134 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 TMEM210A6NLX4 147 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 A8MXE2 369 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 C9JQL5 133 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 RNASEK-C17orf49H0YIS7 233 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 H3BRB1 525 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 LILRB3O75022 631 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 CLDN11O75508 207 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 SDC1P18827 310 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 NDUFV1P49821 464 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 ADIGQ0VDE8 80 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 SCAPQ12770 1279 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 MTAPQ13126 283 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 ZNF345Q14585 488 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 IHHQ14623 411 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 NDUFA9Q16795 377 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 GFI1BQ5VTD9 330 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 FAM46CQ5VWP2 391 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 NKAIN2Q5VXU1 208 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 DEGS2Q6QHC5 323 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 UNQ6126/PRO20091Q6UXV3 157 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 VRK3Q8IV63 474 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 FOXRED2Q8IWF2 684 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 ZNF664Q8N3J9 261 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 HORMAD2Q8N7B1 307 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 SIDT2Q8NBJ9 832 aaKnown RBP8.53□□□□□ -1.04
PDGFC-201ENST00000274071 OR52I2Q8NH67 350 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 DUSP19Q8WTR2 217 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 LCN9Q8WX39 176 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 PHYHIPQ92561 330 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 TM4SF18Q96CE8 201 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 PTPN18Q99952 460 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 TEX101Q9BY14 249 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 ACPTQ9BZG2 426 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 MED17Q9NVC6 651 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 FBXW11Q9UKB1 542 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 MRPL42Q9Y6G3 142 aaKnown RBP8.53□□□□□ -1.04
PDGFC-201ENST00000274071 ENPP4Q9Y6X5 453 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 GNG14A0A1W2PPG7 69 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 C7orf77A4D0Y5 90 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 UPK3BL1B0FP48 263 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 SEC14L6B5MCN3 397 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 UPK3BL2E5RIL1 263 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 SEPT4O43236 478 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 RNF13O43567 381 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 OR2F2O95006 317 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 IL33O95760 270 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 SERPIND1P05546 499 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 SNRNP70P08621 437 aaKnown RBP8.53□□□□□ -1.04
PDGFC-201ENST00000274071 LAMP1P11279 417 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 BMP7P18075 431 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 CCR1P32246 355 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 GDF5P43026 501 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 FZD5Q13467 585 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 OR2F1Q13607 317 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 ZNF630Q2M218 657 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-201ENST00000274071 MST1LQ2TV78 715 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 KHDC3LQ587J8 217 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 PDZD11Q5EBL8 140 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 SMARCD3Q6STE5 483 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 IL34Q6ZMJ4 242 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 LINGO2Q7L985 606 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 TMPRSS11BQ86T26 416 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 OR4L1Q8NH43 312 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 TNFAIP8L1Q8WVP5 186 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 LINGO1Q96FE5 620 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 NOL4LQ96MY1 436 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-201ENST00000274071 ZNF649Q9BS31 505 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 DDA1Q9BW61 102 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 UBQLN3Q9H347 655 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 FBXL4Q9UKA2 621 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 TNFSF18Q9UNG2 199 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 ARL5AQ9Y689 179 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 SIRT4Q9Y6E7 314 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-201ENST00000274071 PIKFYVEQ9Y2I7 2098 aa8.53□□□□□ -1.04
PDGFC-201ENST00000274071 RNF222A6NCQ9 220 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 GGT3PA6NGU5 568 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 DUXAA6NLW8 204 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 F5H0A9 414 aaPredicted RBP8.52□□□□□ -1.04
PDGFC-201ENST00000274071 MANBAO00462 879 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 ADAM10O14672 748 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 PRODHO43272 600 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 OR10H3O60404 316 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 FKTNO75072 461 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 ARG1P05089 322 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 SOX8P57073 446 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 FKBP1BP68106 108 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 EGR3Q06889 387 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 ACSM1Q08AH1 577 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 HNF4GQ14541 408 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 SPRYD7Q5W111 196 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 PGBD2Q6P3X8 592 aa8.52□□□□□ -1.04
PDGFC-201ENST00000274071 DHRS11Q6UWP2 260 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms