RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 OR9Q1Q8NGQ5 310 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 SETD6Q8TBK2 473 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 OMA1Q96E52 524 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 OCIAD1Q9NX40 245 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 STUB1Q9UNE7 303 aa14.01□□□□□ -0.17
SF3B4-201ENST00000271628 PPIEQ9UNP9 301 aaKnown RBP14.01□□□□□ -0.17
SF3B4-201ENST00000271628 TRAV27A0A087WT01 109 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 ELOA3DA6NLF2 546 aaPredicted RBP14□□□□□ -0.17
SF3B4-201ENST00000271628 ZNF670-ZNF695F2Z2N8 137 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 MEN1O00255 615 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 NDUFB5O43674 189 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 EIF4E2O60573 245 aaKnown RBP14□□□□□ -0.17
SF3B4-201ENST00000271628 CPNE3O75131 537 aaKnown RBP14□□□□□ -0.17
SF3B4-201ENST00000271628 TNFSF8P32971 234 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 GRK6P43250 576 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 CCR4P51679 360 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 ZFP36L1Q07352 338 aaKnown RBP14□□□□□ -0.17
SF3B4-201ENST00000271628 ELOA3BQ3SY89 546 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 CBLN3Q6UW01 205 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 CPOQ8IVL8 374 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 ELOA3Q8NG57 546 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 TMCO6Q96DC7 493 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 TNFRSF13CQ96RJ3 184 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 KCNS3Q9BQ31 491 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 ENKD1Q9H0I2 346 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 C12orf10Q9HB07 376 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 APMAPQ9HDC9 416 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 EXOSC4Q9NPD3 245 aaKnown RBP14□□□□□ -0.17
SF3B4-201ENST00000271628 HINT3Q9NQE9 182 aaKnown RBP14□□□□□ -0.17
SF3B4-201ENST00000271628 NDUFB11Q9NX14 153 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 EXOGQ9Y2C4 368 aaKnown RBP14□□□□□ -0.17
SF3B4-201ENST00000271628 ASCC3Q8N3C0 2202 aaKnown RBP14□□□□□ -0.17
SF3B4-201ENST00000271628 SLC2A10O95528 541 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 PEPDP12955 493 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 PAICSP22234 425 aaKnown RBP14□□□□□ -0.17
SF3B4-201ENST00000271628 RPS19P39019 145 aaKnown RBP14□□□□□ -0.17
SF3B4-201ENST00000271628 CRYBB2P43320 205 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 ARMC4Q5T2S8 1044 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 THSD4Q6ZMP0 1018 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 PRR23CQ6ZRP0 262 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 LRFN5Q96NI6 719 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 SDHCQ99643 169 aaPredicted RBP14□□□□□ -0.17
SF3B4-201ENST00000271628 LPAR4Q99677 370 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 TMEM43Q9BTV4 400 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 TBL1XR1Q9BZK7 514 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 SMURF1Q9HCE7 757 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 NPAP1Q9NZP6 1156 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 C19orf25Q9UFG5 118 aaPredicted RBP14□□□□□ -0.17
SF3B4-201ENST00000271628 SSR3Q9UNL2 185 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 ZDBF2Q9HCK1 2354 aa14□□□□□ -0.17
SF3B4-201ENST00000271628 HEATR5AQ86XA9 2040 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 WDR87Q6ZQQ6 2873 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 SLC35F4A4IF30 521 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 OR6C70A6NIJ9 312 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 RIIAD1A6NNX1 92 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 PRR23D1E9PI22 279 aaPredicted RBP13.99□□□□□ -0.17
SF3B4-201ENST00000271628 NDUFB2O95178 105 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 LDOC1O95751 146 aaPredicted RBP13.99□□□□□ -0.17
SF3B4-201ENST00000271628 PRR23D2P0DMB1 279 aaPredicted RBP13.99□□□□□ -0.17
SF3B4-201ENST00000271628 SPNP16150 400 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 HK1P19367 917 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 NOS3P29474 1203 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 ATP6V1E1P36543 226 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 MPLP40238 635 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 ETV5P41161 510 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 SOX3P41225 446 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 SLC1A3P43003 542 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 ETV1P50549 477 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 WNT4P56705 351 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 BCL2A1Q16548 175 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 ARHGAP11AQ6P4F7 1023 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 DBX2Q6ZNG2 339 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 ATG4DQ86TL0 474 aaPredicted RBP13.99□□□□□ -0.17
SF3B4-201ENST00000271628 CACTIN-AS1Q8N1I8 211 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 APCDD1LQ8NCL9 501 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 PSD4Q8NDX1 1056 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 NFAM1Q8NET5 270 aaPredicted RBP13.99□□□□□ -0.17
SF3B4-201ENST00000271628 ZNF563Q8TA94 476 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 NUBPLQ8TB37 319 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 LOXL4Q96JB6 756 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 WDFY2Q96P53 400 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 PHOX2BQ99453 314 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 MOV10Q9HCE1 1003 aaKnown RBP13.99□□□□□ -0.17
SF3B4-201ENST00000271628 ISYNA1Q9NPH2 558 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 CAB39Q9Y376 341 aaPredicted RBP13.99□□□□□ -0.17
SF3B4-201ENST00000271628 ZNF337Q9Y3M9 751 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 PCDHGB2Q9Y5G2 931 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 IGHV3-20A0A0C4DH32 117 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 GNB5O14775 395 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 KHNYNO15037 678 aaKnown RBP13.99□□□□□ -0.17
SF3B4-201ENST00000271628 IFNGP01579 166 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 KLK3P07288 261 aaPredicted RBP13.99□□□□□ -0.17
SF3B4-201ENST00000271628 ZNF3P17036 446 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 ACP1P24666 158 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 RUNX1T1Q06455 604 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 DOC2BQ14184 412 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 LPAL2Q16609 132 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 SLC35F1Q5T1Q4 408 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 PLBD1Q6P4A8 553 aa13.99□□□□□ -0.17
SF3B4-201ENST00000271628 MEPCEQ7L2J0 689 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms