RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TRA2BP62995 288 aaKnown RBP11.28□□□□□ -0.6
COL8A1-201ENST00000261037 TMEM244Q5VVB8 128 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 FAM111BQ6SJ93 734 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 OR1J4Q8NGS1 313 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 SLC6A20Q9NP91 592 aa11.28□□□□□ -0.6
COL8A1-201ENST00000261037 IFNA10P01566 189 aa11.27□□□□□ -0.6
COL8A1-201ENST00000261037 VEGFCP49767 419 aa11.27□□□□□ -0.6
COL8A1-201ENST00000261037 CLDN6P56747 220 aa11.27□□□□□ -0.6
COL8A1-201ENST00000261037 CLDN12P56749 244 aa11.27□□□□□ -0.6
COL8A1-201ENST00000261037 RAB38P57729 211 aa11.27□□□□□ -0.6
COL8A1-201ENST00000261037 MMP21Q8N119 569 aa11.27□□□□□ -0.6
COL8A1-201ENST00000261037 OR2A12Q8NGT7 310 aa11.27□□□□□ -0.6
COL8A1-201ENST00000261037 HAS2Q92819 552 aa11.27□□□□□ -0.6
COL8A1-201ENST00000261037 ZBTB8AQ96BR9 441 aa11.27□□□□□ -0.6
COL8A1-201ENST00000261037 GIMAP5Q96F15 307 aa11.27□□□□□ -0.6
COL8A1-201ENST00000261037 MS4A4AQ96JQ5 239 aa11.27□□□□□ -0.6
COL8A1-201ENST00000261037 SORCS2Q96PQ0 1159 aa11.27□□□□□ -0.6
COL8A1-201ENST00000261037 PITHD1Q9GZP4 211 aaPredicted RBP11.27□□□□□ -0.6
COL8A1-201ENST00000261037 IFNA17P01571 189 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 OR8G3PP0DMU2 310 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 ACP2P11117 423 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 SLC14A1Q13336 389 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 SLC16A14Q7RTX9 510 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 VRK3Q8IV63 474 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 TMEM185AQ8NFB2 350 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 OR14K1Q8NGZ2 314 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 DUSP19Q8WTR2 217 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 TFAP2CQ92754 450 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 TCTN2Q96GX1 697 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 DHRS4Q9BTZ2 278 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 CALHM2Q9HA72 323 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 CSNK1G1Q9HCP0 422 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 PRSS16Q9NQE7 514 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 TM7SF3Q9NS93 570 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 HIF1ANQ9NWT6 349 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF223Q9UK11 482 aaPredicted RBP11.27□□□□□ -0.61
COL8A1-201ENST00000261037 TMEM189-UBE2V1I3L0A0 370 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 BET1O15155 118 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 DNAJB6O75190 326 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 IDH3GP51553 393 aaPredicted RBP11.27□□□□□ -0.61
COL8A1-201ENST00000261037 ATP1B3P54709 279 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 KCNJ10P78508 379 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 TSSK4Q6SA08 328 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 ESPNLQ6ZVH7 1005 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 RABEPKQ7Z6M1 372 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF808Q8N4W9 903 aaPredicted RBP11.27□□□□□ -0.61
COL8A1-201ENST00000261037 PPP1R35Q8TAP8 253 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 SLC7A13Q8TCU3 470 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 SPIN2AQ99865 258 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 SPIN2BQ9BPZ2 258 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 TWSG1Q9GZX9 223 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 TAS2R16Q9NYV7 291 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 ASB4Q9Y574 426 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 SLC43A1O75387 559 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 TACR3P29371 465 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 RPL23AP62750 156 aaKnown RBP11.27□□□□□ -0.61
COL8A1-201ENST00000261037 CXADRP78310 365 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 HNF4GQ14541 408 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF534Q76KX8 674 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 FCRLAQ7L513 359 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 OLIG3Q7RTU3 272 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 GRAMD2AQ8IUY3 354 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 FAM160A2Q8N612 972 aaPredicted RBP11.27□□□□□ -0.61
COL8A1-201ENST00000261037 DNAJC5GQ8N7S2 189 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 MIB2Q96AX9 1013 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 WWTR1Q9GZV5 400 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 MFFQ9GZY8 342 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 ANKRD10Q9NXR5 420 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 DHCR7Q9UBM7 475 aaKnown RBP11.27□□□□□ -0.61
COL8A1-201ENST00000261037 HHLA2Q9UM44 414 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 CEPT1Q9Y6K0 416 aa11.27□□□□□ -0.61
COL8A1-201ENST00000261037 ARNTLO00327 626 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 ENSAO43768 121 aaKnown RBP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 TUSC2O75896 110 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 RPS25P62851 125 aaKnown RBP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 SIRPAP78324 504 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 FAM69AQ5T7M9 428 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 APOOLQ6UXV4 268 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 LINC00696Q6ZRV3 163 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 CNTN4Q8IWV2 1026 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 OR5L1Q8NGL2 311 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 PLEKHM1Q9Y4G2 1056 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 USP3Q9Y6I4 520 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 ANKRD33BA6NCL7 494 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 GMDSO60547 372 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 RFPL3O75679 317 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 CYCSP99999 105 aaKnown RBP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 SLC7A5P1Q8MH63 180 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 OR7G2Q8NG99 324 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 GTF2H4Q92759 462 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 C20orf27Q9GZN8 174 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 DDX60Q8IY21 1712 aaKnown RBP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 TCRBV3S1A0A5B6 114 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 METTL15A6NJ78 407 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 ACOD1A6NK06 481 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF705FA8MVS1 300 aaPredicted RBP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 ZBTB42B2RXF5 422 aa11.26□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF705DP0CH99 300 aaPredicted RBP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF705BP0CI00 300 aaPredicted RBP11.26□□□□□ -0.61
COL8A1-201ENST00000261037 CD46P15529 392 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms