RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 TIMM23BQ5SRD1 257 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 MRPL2Q5T653 305 aaKnown RBP16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 CROCCP2Q86T23 111 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 MAPK1IP1LQ8NDC0 245 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 OR52N5Q8NH56 324 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 MTHFD2LQ9H903 347 aaPredicted RBP16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 RLIMQ9NVW2 624 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 TMEM181Q9P2C4 612 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 ALPK2Q86TB3 2170 aa16.77■□□□□ 0.27
TM6SF1-201ENST00000258909 SONP18583 2426 aaKnown RBP16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 CIB4A0PJX0 185 aa16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 ZC3H12DA2A288 527 aaKnown RBP16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 OR5H1A6NKK0 313 aa16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 CCT8L1PA6NM43 557 aa16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 RFXANKO14593 260 aa16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 TMCC2O75069 709 aa16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 PGM3O95394 542 aa16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 ANXA11P50995 505 aaKnown RBP16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 POLR2HP52434 150 aaKnown RBP16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 CLEC12BQ2HXU8 276 aa16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 CMIPQ8IY22 773 aa16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 PIGXQ8TBF5 258 aa16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 CISD1Q9NZ45 108 aaKnown RBP16.76■□□□□ 0.27
TM6SF1-201ENST00000258909 SHISA9B4DS77 424 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 INAFM1C9JVW0 142 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 ABCD4O14678 606 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 NDUFS7O75251 213 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 MRPL33O75394 65 aaKnown RBP16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 SLC22A3O75751 556 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 GKN3PP0CG01 181 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 ETFAP13804 333 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 RPS4Y1P22090 263 aaKnown RBP16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 SLC1A3P43003 542 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 HTR3AP46098 478 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 CLK1P49759 484 aaKnown RBP16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 MAGOHP61326 146 aaKnown RBP16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 VEZF1Q14119 521 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 GTDC1Q4AE62 458 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 MAVSQ7Z434 540 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 VRK2Q86Y07 508 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 GLB1L3Q8NCI6 653 aaPredicted RBP16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 OR52E4Q8NGH9 312 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 DDIT4LQ96D03 193 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 TRMT61AQ96FX7 289 aaKnown RBP16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 TRAPPC4Q9Y296 219 aa16.75■□□□□ 0.27
TM6SF1-201ENST00000258909 CFAP73A6NFT4 308 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 RNF223E7ERA6 249 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 GPR171O14626 319 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 KRT75O95678 551 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 CD8AP01732 235 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 DBIP07108 87 aaKnown RBP16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 FKBP2P26885 142 aaKnown RBP16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 CRATP43155 626 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 MAGEA8P43361 318 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 ZNF83P51522 516 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 MVDP53602 400 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 SLC16A1P53985 500 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 H3F3AP84243 136 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 LRRC74AQ0VAA2 488 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 EPS8Q12929 822 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 GNA13Q14344 377 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 PDCD4Q53EL6 469 aaKnown RBP16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 C9orf135Q5VTT2 229 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 ATG16L1Q676U5 607 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 CASP12Q6UXS9 341 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 ZNF836Q6ZNA1 936 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 PIAS4Q8N2W9 510 aaPredicted RBP16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 AURKBQ96GD4 344 aaPredicted RBP16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 OR52B2Q96RD2 323 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 C1QTNF6Q9BXI9 259 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 MANSC1Q9H8J5 431 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 ASB6Q9NWX5 421 aa16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 HEATR1Q9H583 2144 aaKnown RBP16.74■□□□□ 0.27
TM6SF1-201ENST00000258909 ZNF208O43345 1280 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 DNPH1O43598 174 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 ANP32DO95626 131 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 IL6P05231 212 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 IDO1P14902 403 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 ACVR1BP36896 505 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 CDH11P55287 796 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 SLC35A1P78382 337 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 SPOCK1Q08629 439 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 RPS26P11Q5JNZ5 115 aaPredicted RBP16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 P2RY8Q86VZ1 359 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 PEX5LQ8IYB4 626 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 OR9I1Q8NGQ6 314 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 OR52P1PQ8NH57 321 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 MAELQ96JY0 434 aaKnown RBP16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 GDF2Q9UK05 429 aaPredicted RBP16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 FLVCR1Q9Y5Y0 555 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 ANK3Q12955 4377 aaKnown RBP16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 SLCO1B7G3V0H7 640 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 IGHV4-39P01824 125 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 BCHEP06276 602 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 ITGA5P08648 1049 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 TXNL4AP83876 142 aaKnown RBP16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 BNIP2Q12982 314 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 PRIMA1Q86XR5 153 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 CADM2Q8N3J6 435 aa16.73■□□□□ 0.27
TM6SF1-201ENST00000258909 PMM1Q92871 262 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms