RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 RPS11P62280 158 aaKnown RBP eCLIP14.01□□□□□ -0.17
DDX56-201ENST00000258772 ALG11Q2TAA5 492 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 OR11H7Q8NGC8 314 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 LRFN5Q96NI6 719 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 CNN2Q99439 309 aaKnown RBP14.01□□□□□ -0.17
DDX56-201ENST00000258772 SMAD5Q99717 465 aaKnown RBP14.01□□□□□ -0.17
DDX56-201ENST00000258772 CCDC86Q9H6F5 360 aaKnown RBP14.01□□□□□ -0.17
DDX56-201ENST00000258772 BRD7Q9NPI1 651 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 HRASLS2Q9NWW9 162 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 MRPL39Q9NYK5 338 aaKnown RBP14.01□□□□□ -0.17
DDX56-201ENST00000258772 STMN3Q9NZ72 180 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 ING4Q9UNL4 249 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 ENTPD2Q9Y5L3 495 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 IER3IP1Q9Y5U9 82 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 OR10H2O60403 315 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 UCHL1P09936 223 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 HNRNPA2B1P22626 353 aaKnown RBP14.01□□□□□ -0.17
DDX56-201ENST00000258772 NAA10P41227 235 aaPredicted RBP14.01□□□□□ -0.17
DDX56-201ENST00000258772 RAB38P57729 211 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 VSX2P58304 361 aaPredicted RBP14.01□□□□□ -0.17
DDX56-201ENST00000258772 ACTA2P62736 377 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 ACTG2P63267 376 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 C19orf57Q0VDD7 668 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 CDONQ4KMG0 1287 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 RNASE12Q5GAN4 147 aaKnown RBP14.01□□□□□ -0.17
DDX56-201ENST00000258772 ULK3Q6PHR2 472 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 ESPNLQ6ZVH7 1005 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 POMGNT2Q8NAT1 580 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 LMF2Q9BU23 707 aaKnown RBP14.01□□□□□ -0.17
DDX56-201ENST00000258772 CACNG6Q9BXT2 260 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 MFRPQ9BY79 579 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 GSDMCQ9BYG8 508 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 SLC23A1Q9UHI7 598 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 TICRRQ7Z2Z1 1910 aa14.01□□□□□ -0.17
DDX56-201ENST00000258772 A0A0J9YY10 115 aa14□□□□□ -0.17
DDX56-201ENST00000258772 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14□□□□□ -0.17
DDX56-201ENST00000258772 MCIDASD6RGH6 385 aa14□□□□□ -0.17
DDX56-201ENST00000258772 GNB5O14775 395 aa14□□□□□ -0.17
DDX56-201ENST00000258772 HCRTR1O43613 425 aa14□□□□□ -0.17
DDX56-201ENST00000258772 RDH16O75452 317 aa14□□□□□ -0.17
DDX56-201ENST00000258772 CAMK2BQ13554 666 aa14□□□□□ -0.17
DDX56-201ENST00000258772 GGTLC2Q14390 218 aa14□□□□□ -0.17
DDX56-201ENST00000258772 ANGPT1Q15389 498 aa14□□□□□ -0.17
DDX56-201ENST00000258772 RPL22L1Q6P5R6 122 aaKnown RBP14□□□□□ -0.17
DDX56-201ENST00000258772 SLC35F2Q8IXU6 374 aa14□□□□□ -0.17
DDX56-201ENST00000258772 SNX33Q8WV41 574 aa14□□□□□ -0.17
DDX56-201ENST00000258772 OR2M2Q96R28 347 aa14□□□□□ -0.17
DDX56-201ENST00000258772 OR51J1Q9H342 316 aa14□□□□□ -0.17
DDX56-201ENST00000258772 EMC7Q9NPA0 242 aa14□□□□□ -0.17
DDX56-201ENST00000258772 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14□□□□□ -0.17
DDX56-201ENST00000258772 SLCO1C1Q9NYB5 712 aa14□□□□□ -0.17
DDX56-201ENST00000258772 COPZ2Q9P299 210 aa14□□□□□ -0.17
DDX56-201ENST00000258772 CPNE7Q9UBL6 633 aa14□□□□□ -0.17
DDX56-201ENST00000258772 ZNF222Q9UK12 451 aa14□□□□□ -0.17
DDX56-201ENST00000258772 SPATA2Q9UM82 520 aa14□□□□□ -0.17
DDX56-201ENST00000258772 CAMK2AQ9UQM7 478 aa14□□□□□ -0.17
DDX56-201ENST00000258772 AK6Q9Y3D8 172 aaKnown RBP14□□□□□ -0.17
DDX56-201ENST00000258772 REV3LO60673 3130 aa14□□□□□ -0.17
DDX56-201ENST00000258772 TRBV2A0A0J9YWF9 115 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 LRRN3E7EW58 273 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 TNFRSF10AO00220 468 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 GATBO75879 557 aaKnown RBP13.99□□□□□ -0.17
DDX56-201ENST00000258772 EGFP01133 1207 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 GUSBP08236 651 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 FAM53BQ14153 422 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 PON3Q15166 354 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 ZNHIT3Q15649 155 aaPredicted RBP13.99□□□□□ -0.17
DDX56-201ENST00000258772 CD276Q5ZPR3 534 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 KIRREL2Q6UWL6 708 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 OVCH1Q7RTY7 1134 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 ZNF550Q7Z398 422 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 UBE2Q1Q7Z7E8 422 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 SLITRK4Q8IW52 837 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 SFTPA2Q8IWL1 248 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 ZNRF4Q8WWF5 429 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 ADAMTS14Q8WXS8 1223 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 OR14A2Q96R54 314 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 CITED4Q96RK1 184 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 LRRN3Q9H3W5 708 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 RANBP3Q9H6Z4 567 aaPredicted RBP13.99□□□□□ -0.17
DDX56-201ENST00000258772 ZFP64Q9NPA5 681 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 TEKT2Q9UIF3 430 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 GNG8Q9UK08 70 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 ADAM18Q9Y3Q7 739 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 SPTBP11277 2137 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 CD1AP06126 327 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 DIO1P49895 249 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 CCR6P51684 374 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 ILF3Q12906 894 aaKnown RBP eCLIP13.99□□□□□ -0.17
DDX56-201ENST00000258772 OR14A16Q8NHC5 309 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 ZNF431Q8TF32 576 aaPredicted RBP13.99□□□□□ -0.17
DDX56-201ENST00000258772 SGTBQ96EQ0 304 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 PDCD1LG2Q9BQ51 273 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 CCDC3Q9BQI4 270 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 ORAI3Q9BRQ5 295 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 TMEM106CQ9BVX2 250 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 RPS6KB2Q9UBS0 482 aa13.99□□□□□ -0.17
DDX56-201ENST00000258772 TP53BP1Q12888 1972 aaPredicted RBP13.99□□□□□ -0.17
DDX56-201ENST00000258772 LINC01565O15544 149 aa13.98□□□□□ -0.17
DDX56-201ENST00000258772 ANKRD34CP0C6C1 535 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms