RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 NCR1O76036 304 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 DHRS4L1P0CG22 281 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 SMIM10L2AP0DMW4 78 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 SMIM10L2BP0DMW5 78 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 HNRNPA2B1P22626 353 aaKnown RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 CDKN1BP46527 198 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 RAP1BP61224 184 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 TLE1Q04724 770 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 RASGEF1BQ0VAM2 473 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 GAGE1Q13065 139 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 PIN1Q13526 163 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 VEZF1Q14119 521 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 MAD2L1BPQ15013 274 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 OTUD1Q5VV17 481 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 ETFBKMTQ8IXQ9 262 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 PNLDC1Q8NA58 520 aaKnown RBP6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 ASB13Q8WXK3 278 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 OSMRQ99650 979 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 OMDQ99983 421 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 SOX7Q9BT81 388 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 MMP26Q9NRE1 261 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 PKP3Q9Y446 797 aa6.32□□□□□ -1.4
PDGFRA-201ENST00000257290 RNASEK-C17orf49H0YIS7 233 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 M0R296 226 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OR5AC1P0C628 307 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 MDH2P40926 338 aaKnown RBP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 CLCN5P51795 746 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 CAPSQ13938 189 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 ACKR1Q16570 336 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 DECR1Q16698 335 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 NKAIN2Q5VXU1 208 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 DHRS7BQ6IAN0 325 aaPredicted RBP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 LYPD4Q6UWN0 246 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 CMC1Q7Z7K0 106 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OR1J2Q8NGS2 313 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OR13C4Q8NGS5 318 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OR10J5Q8NHC4 309 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 APH1BQ8WW43 257 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OR52E6Q96RD3 313 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 KLK14Q9P0G3 267 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 COPS7AQ9UBW8 275 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OR51B4Q9Y5P0 310 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 MEIKINA0A087WXM9 373 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 EDDM13A0A1B0GTR0 161 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 DCTN6O00399 190 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 ADRB2P07550 413 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 SULT1A3P0DMM9 295 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 SULT1A4P0DMN0 295 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 HTD2P86397 168 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 MC1RQ01726 317 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 PJVKQ0ZLH3 352 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 PPP1R8Q12972 351 aaKnown RBP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 LARP4Q71RC2 724 aaKnown RBP eCLIP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 C17orf64Q86WR6 236 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OR4N5Q8IXE1 308 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 NANOGP1Q8N7R0 232 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 YIPF6Q96EC8 236 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 UBXN10Q96LJ8 280 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 GPR20Q99678 358 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 SEPSECSQ9HD40 501 aaKnown RBP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 AK3Q9UIJ7 227 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OR2A25A4D2G3 310 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 E5RJQ4 531 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 M0R1X1 148 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 ANGPTL7O43827 346 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 MSCO60682 206 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 C6orf47O95873 294 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 FGF3P11487 239 aaPredicted RBP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 FBLP22087 321 aaKnown RBP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 IMPA1P29218 277 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 RAB10P61026 200 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 IL27RAQ6UWB1 636 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 MYPOPQ86VE0 399 aaPredicted RBP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 GLB1L2Q8IW92 636 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 DBF4BQ8NFT6 615 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OR52L1Q8NGH7 329 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OR5D16Q8NGK9 328 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OR5M1Q8NGP8 315 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF516Q92618 1163 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 PYURFQ96I23 114 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF558Q96NG5 402 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 SIGMAR1Q99720 223 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 SGPP1Q9BX95 441 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 TAS2R14Q9NYV8 317 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 EFSO43281 561 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 GLSO94925 669 aaPredicted RBP6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 IGHV2-70P01814 119 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 MT-ND4P03905 459 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 OR5G3P0C626 314 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 LINC00032P0C843 101 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 RPA2P15927 270 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 GRK6P43250 576 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 XKR4Q5GH76 650 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 SPIN3Q5JUX0 258 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF684Q5T5D7 378 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 SERPINA13PQ6UXR4 307 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 ZDHHC14Q8IZN3 488 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC38A9Q8NBW4 561 aa6.31□□□□□ -1.4
PDGFRA-201ENST00000257290 FAM46AQ96IP4 442 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms