RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 A0A1W2PRU2 124 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 RNASET2O00584 256 aaKnown RBP12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 SCGB2A1O75556 95 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 PLGP00747 810 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 RPS19P39019 145 aaKnown RBP12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 PSMB10P40306 273 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 SLC11A1P49279 550 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 PER3P56645 1201 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 MFGE8Q08431 387 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 FIGNL1Q6PIW4 674 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 TMEM107Q6UX40 140 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 C15orf54Q8N8G6 183 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 LGALS14Q8TCE9 139 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 APIPQ96GX9 242 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 SCML1Q9UN30 329 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 ZNF281Q9Y2X9 895 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 CFAP20Q9Y6A4 193 aaKnown RBP12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 SLC31A1O15431 190 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 FOXA1P55317 472 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 GAB1Q13480 694 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 ADIPOR2Q86V24 386 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 C22orf15Q8WYQ4 148 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 LIN7BQ9HAP6 207 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 EHFQ9NZC4 300 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 YIPF1Q9Y548 306 aa12.32□□□□□ -0.44
PCDHGA3-201ENST00000253812 IGKV6D-21A0A0A0MT36 114 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 LCN6P62502 163 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 ACOT7LQ6ZUV0 252 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 MAMDC2Q7Z304 686 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 COMMD6Q7Z4G1 85 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 OR13C2Q8NGS9 318 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 ZNF251Q9BRH9 671 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 TAF9BQ9HBM6 251 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 RYDENQ9NUL5 291 aaKnown RBP12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 ABI3Q9P2A4 366 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 FAM96BQ9Y3D0 163 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 PDGFBP01127 241 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 SLC10A3P09131 477 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 MMP7P09237 267 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 HRH2P25021 359 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 GATMP50440 423 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 ARSDP51689 593 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 ID2Q02363 134 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 SOX4Q06945 474 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 HABP2Q14520 560 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 PDLIM3Q53GG5 364 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 MDGA2Q7Z553 956 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 OR6S1Q8NH40 331 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 WFIKKN2Q8TEU8 576 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 NARFLQ9H6Q4 476 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 EGLN3Q9H6Z9 239 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 AKIP1Q9NQ31 210 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 MED17Q9NVC6 651 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 BTBD17A6NE02 478 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 TAAR5O14804 337 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 KITLGP21583 273 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 EMP2P54851 167 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 SLC35A2P78381 396 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 MLC1Q15049 377 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 TMEM35AQ53FP2 167 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 ZNF322Q6U7Q0 402 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 Q6ZPB1 254 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 SERINC5Q86VE9 423 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 OR5D14Q8NGL3 314 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 OR1J1Q8NGS3 322 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 TMEM239Q8WW34 195 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 PHYHIPQ92561 330 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 CORO2AQ92828 525 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 CCDC74BQ96LY2 380 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 UBR2Q8IWV8 1755 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 MN1Q10571 1320 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 IGKV6-21A0A0C4DH24 114 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 OR6C68A6NDL8 312 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 SOCS5O75159 536 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 HLA-DOBP13765 273 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 SUMO1P63165 101 aaKnown RBP12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 HBG1P69891 147 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 HBG2P69892 147 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 TXNDC8Q6A555 127 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 BRICD5Q6PL45 260 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 VITQ6UXI7 678 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 UMODL1-AS1Q8N2C9 162 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 DCAF4L2Q8NA75 395 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 SLC25A46Q96AG3 418 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 F2RL3Q96RI0 385 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 NRIP3Q9NQ35 241 aa12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 ACSS1Q9NUB1 689 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA3-201ENST00000253812 MYADML2A6NDP7 307 aa12.3□□□□□ -0.44
PCDHGA3-201ENST00000253812 CNMDO75829 334 aa12.3□□□□□ -0.44
PCDHGA3-201ENST00000253812 GABRB1P18505 474 aa12.3□□□□□ -0.44
PCDHGA3-201ENST00000253812 SDC1P18827 310 aa12.3□□□□□ -0.44
PCDHGA3-201ENST00000253812 PGCP20142 388 aa12.3□□□□□ -0.44
PCDHGA3-201ENST00000253812 SLC5A12Q1EHB4 618 aa12.3□□□□□ -0.44
PCDHGA3-201ENST00000253812 SMUG1Q53HV7 270 aa12.3□□□□□ -0.44
PCDHGA3-201ENST00000253812 ARSIQ5FYB1 569 aa12.3□□□□□ -0.44
PCDHGA3-201ENST00000253812 TPGS2Q68CL5 300 aa12.3□□□□□ -0.44
PCDHGA3-201ENST00000253812 OR2T2Q6IF00 324 aa12.3□□□□□ -0.44
PCDHGA3-201ENST00000253812 HCAR1Q9BXC0 346 aa12.3□□□□□ -0.44
PCDHGA3-201ENST00000253812 C11orf49Q9H6J7 331 aa12.3□□□□□ -0.44
PCDHGA3-201ENST00000253812 MYH1P12882 1939 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms