RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 RNF215Q9Y6U7 377 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 A8MU76 341 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 M0R296 226 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 RGS9O75916 674 aaPredicted RBP17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 GUSBP08236 651 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 MYF5P13349 255 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 ALAS2P22557 587 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 APEX1P27695 318 aaKnown RBP17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 CD226Q15762 336 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 FAAH2Q6GMR7 532 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 CNIH2Q6PI25 160 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 TMEM105Q8N8V8 129 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 FAM98AQ8NCA5 519 aaKnown RBP17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 TSLPQ969D9 159 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 ZMYND19Q96E35 227 aaPredicted RBP17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 TRIM36Q9NQ86 728 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 PILRBQ9UKJ0 227 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 GRIP1Q9Y3R0 1128 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 IER3IP1Q9Y5U9 82 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 SOX30O94993 753 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 SLC3A1Q07837 685 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 P2RY14Q15391 338 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 SHBQ15464 509 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 MED25Q71SY5 747 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 OR5J2Q8NH18 312 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 SETD6Q8TBK2 473 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 PTPMT1Q8WUK0 201 aaPredicted RBP17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 ZNRF4Q8WWF5 429 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 SLC35B4Q969S0 331 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 SGTBQ96EQ0 304 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 COQ7Q99807 217 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 CCDC86Q9H6F5 360 aaKnown RBP17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 MKKSQ9NPJ1 570 aaPredicted RBP17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 DHCR7Q9UBM7 475 aaKnown RBP17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 CHRNA9Q9UGM1 479 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 POLHQ9Y253 713 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 GIMD1P0DJR0 217 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 OR1D5P58170 312 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 BDH1Q02338 343 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 SNAP47Q5SQN1 464 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 ARHGAP11AQ6P4F7 1023 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 SLC35F3Q8IY50 421 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 ZPLD1Q8TCW7 415 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 ADAMTS18Q8TE60 1221 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 C3orf49Q96BT1 292 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 KLHDC3Q9BQ90 382 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 NDC1Q9BTX1 674 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 MMP28Q9H239 520 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 LANCL2Q9NS86 450 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 PCDHGB2Q9Y5G2 931 aa17.13■□□□□ 0.33
PDLIM4-201ENST00000253754 TNRC6BQ9UPQ9 1833 aaKnown RBP17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 A0A087WUJ7 227 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 MT-ND5P03915 603 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 ACVR1BP36896 505 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 NKX2-5P52952 324 aaPredicted RBP17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 OR2B6P58173 313 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 GALNT6Q8NCL4 622 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 TP53INP1Q96A56 240 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 ZNF524Q96C55 264 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 SMAD5Q99717 465 aaKnown RBP17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 C11orf54Q9H0W9 315 aaPredicted RBP17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 EVA1AQ9H8M9 152 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 BLACEA4D250 179 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 C4orf47A7E2U8 309 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 EFCAB7A8K855 629 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 TFECO14948 347 aaPredicted RBP17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 NDUFB2O95178 105 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 TFP02787 698 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 SHC1P29353 583 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 NAA10P41227 235 aaPredicted RBP17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 CCR4P51679 360 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 EFNA3P52797 238 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 PPP3R1P63098 170 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 GPR50Q13585 617 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 KLHL26Q53HC5 615 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 TCTE1Q5JU00 501 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 CBLN3Q6UW01 205 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 OR13C5Q8NGS8 318 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 AHCYL2Q96HN2 611 aaKnown RBP17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 OR8D2Q9GZM6 311 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 KLHL1Q9NR64 748 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 CUTCQ9NTM9 273 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 BAIAP2Q9UQB8 552 aa17.12■□□□□ 0.33
PDLIM4-201ENST00000253754 IGKV1D-42A0A075B6H8 117 aa17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 FITM1A5D6W6 292 aa17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 TMEM150CB9EJG8 249 aa17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 SERPINI2O75830 405 aa17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 OR2B3O76000 313 aa17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 IFNGP01579 166 aa17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 RPL4P36578 427 aaKnown RBP17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 TMED10P49755 219 aaKnown RBP17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 GPR143P51810 404 aa17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 PSMD4P55036 377 aaKnown RBP17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 SCN1BQ07699 218 aa17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 IL20RBQ6UXL0 311 aa17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 APOOLQ6UXV4 268 aa17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 UTS2BQ765I0 119 aa17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 PRR22Q8IZ63 422 aa17.11■□□□□ 0.33
PDLIM4-201ENST00000253754 GDPD1Q8N9F7 314 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms