RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 NRF1Q16656 503 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 PGS1Q32NB8 556 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 SAXO2Q658L1 398 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 B3GLCTQ6Y288 498 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 C16orf62Q7Z3J2 963 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 HIPK1Q86Z02 1210 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 OR10H5Q8NGA6 315 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 ARL8AQ96BM9 186 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 TESCQ96BS2 214 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 ZG16BQ96DA0 208 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 MUCL1Q96DR8 90 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 NEURL3Q96EH8 262 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 RADILQ96JH8 1075 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 ARL5BQ96KC2 179 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 OR51I1Q9H343 314 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 CTPS2Q9NRF8 586 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 EXD2Q9NVH0 621 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 FAIMQ9NVQ4 179 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 CHRNA9Q9UGM1 479 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 HAO1Q9UJM8 370 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 B3GALT5Q9Y2C3 310 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 SLC35A3Q9Y2D2 325 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 HDGFL3Q9Y3E1 203 aa9.07□□□□□ -0.96
VPS50-201ENST00000251739 IGHV4-30-2A0A087WSY4 118 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 PRSS51A0A1B0GVH4 220 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 GPR171O14626 319 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 ITM2AO43736 263 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 RAD51DO75771 328 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 CYP7B1O75881 506 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 AGR2O95994 175 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 C1QCP02747 245 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 ITGA5P08648 1049 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 OR12D1P0DN82 309 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 TTKP33981 857 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 CLK1P49759 484 aaKnown RBP9.06□□□□□ -0.96
VPS50-201ENST00000251739 VSNL1P62760 191 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 IRX1P78414 480 aaPredicted RBP9.06□□□□□ -0.96
VPS50-201ENST00000251739 SPOCK1Q08629 439 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 CASP8Q14790 479 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 GABRA6Q16445 453 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 TNFAIP8L2Q6P589 184 aaPredicted RBP9.06□□□□□ -0.96
VPS50-201ENST00000251739 TMEM108Q6UXF1 575 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 GRINAQ7Z429 371 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 ANKRD46Q86W74 232 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 LSRQ86X29 649 aaPredicted RBP9.06□□□□□ -0.96
VPS50-201ENST00000251739 ADGRG3Q86Y34 549 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 ZNF100Q8IYN0 542 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 LRRC34Q8IZ02 419 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 ZNF781Q8N8C0 355 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 PIGXQ8TBF5 258 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 AENQ8WTP8 325 aaKnown RBP9.06□□□□□ -0.96
VPS50-201ENST00000251739 APH1AQ96BI3 265 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 ROPN1LQ96C74 230 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 HS6ST2Q96MM7 605 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 MUS81Q96NY9 551 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 SORT1Q99523 831 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 TMEM109Q9BVC6 243 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 ROPN1BQ9BZX4 212 aaPredicted RBP9.06□□□□□ -0.96
VPS50-201ENST00000251739 OR11A1Q9GZK7 315 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 AKTIPQ9H8T0 292 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 ROPN1Q9HAT0 212 aaPredicted RBP9.06□□□□□ -0.96
VPS50-201ENST00000251739 SERINC1Q9NRX5 453 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 TAS2R16Q9NYV7 291 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 WDR45Q9Y484 360 aa9.06□□□□□ -0.96
VPS50-201ENST00000251739 SPIN1Q9Y657 262 aaPredicted RBP9.06□□□□□ -0.96
VPS50-201ENST00000251739 A6NHS1 94 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 CLDN24A6NM45 220 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 H7C417 338 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 HMGN4O00479 90 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 FAAHO00519 579 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 IGHV3-9P01782 118 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 TP53P04637 393 aaPredicted RBP9.05□□□□□ -0.96
VPS50-201ENST00000251739 SERPINE1P05121 402 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 DHRS4L1P0CG22 281 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 RPS4Y1P22090 263 aaKnown RBP9.05□□□□□ -0.96
VPS50-201ENST00000251739 UQCRC2P22695 453 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 PTAFRP25105 342 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 CD40P25942 277 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 FKBP2P26885 142 aaKnown RBP9.05□□□□□ -0.96
VPS50-201ENST00000251739 KHKP50053 298 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 CASP9P55211 416 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 SLC25A3Q00325 362 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 PDCD2Q16342 344 aaPredicted RBP9.05□□□□□ -0.96
VPS50-201ENST00000251739 DPY19L1Q2PZI1 675 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 SPANXN4Q5MJ08 99 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 C1QTNF12Q5T7M4 302 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 AGAP6Q5VW22 663 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 CCDC103Q8IW40 242 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 WDR31Q8NA23 367 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 C1orf162Q8NEQ5 155 aaPredicted RBP9.05□□□□□ -0.96
VPS50-201ENST00000251739 OR4A15Q8NGL6 344 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 CNOT9Q92600 299 aaKnown RBP9.05□□□□□ -0.96
VPS50-201ENST00000251739 RAB8BQ92930 207 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 ZHX1-C8orf76Q96EF9 292 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 CCDC115Q96NT0 180 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 DHRS9Q9BPW9 319 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 CACNG6Q9BXT2 260 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 C20orf27Q9GZN8 174 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 SLC38A1Q9H2H9 487 aa9.05□□□□□ -0.96
VPS50-201ENST00000251739 CBLN4Q9NTU7 201 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms