RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CTRB1P17538 263 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 POU3F1Q03052 451 aaPredicted RBP12.38□□□□□ -0.43
NEK9-201ENST00000238616 CTRB2Q6GPI1 263 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 HPSE2Q8WWQ2 592 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 OR4M1Q8NGD0 313 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 APOOQ9BUR5 198 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 SSUH2Q9Y2M2 353 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 ATRNO75882 1429 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 IGHV3-64DA0A0J9YX35 117 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 SOBPA7XYQ1 873 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 SNCGO76070 127 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 ZFAND5O76080 213 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 HLA-DOBP13765 273 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 HTR3AP46098 478 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 ACVR1CQ8NER5 493 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 APIPQ96GX9 242 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 FAXDC2Q96IV6 333 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 RBM14Q96PK6 669 aaKnown RBP12.38□□□□□ -0.43
NEK9-201ENST00000238616 LINC00597Q9H2U6 94 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 ZFP57Q9NU63 452 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 ZNF816-ZNF321PA0A0X1KG74 233 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 HIDE1A8MVS5 230 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 IGHV3-9P01782 118 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 CYP1B1Q16678 543 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 RBMS3Q6XE24 437 aaKnown RBP12.38□□□□□ -0.43
NEK9-201ENST00000238616 TMEM184AQ6ZMB5 413 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 ZNF321PQ8N8H1 164 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 C1QTNF6Q9BXI9 259 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 XPNPEP1Q9NQW7 623 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 A0A0U1RQS6 177 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 EEDO75530 441 aaKnown RBP12.38□□□□□ -0.43
NEK9-201ENST00000238616 HNRNPA1P09651 372 aaKnown RBP eCLIP12.38□□□□□ -0.43
NEK9-201ENST00000238616 FCGR2AP12318 317 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 CBR1P16152 277 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 CD6P30203 668 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 CLDN17P56750 224 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 PSAPL1Q6NUJ1 521 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 DEDD2Q8WXF8 326 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 HLA-CQ95604 372 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 CPNE7Q9UBL6 633 aa12.38□□□□□ -0.43
NEK9-201ENST00000238616 GABRR3A8MPY1 467 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 NUPL2O15504 423 aaKnown RBP12.37□□□□□ -0.43
NEK9-201ENST00000238616 SCRG1O75711 98 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 TIMP1P01033 207 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 F13BP05160 661 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 TMEM176BQ3YBM2 270 aaPredicted RBP12.37□□□□□ -0.43
NEK9-201ENST00000238616 CNIH2Q6PI25 160 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 ZUFSPQ96AP4 578 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 MMP28Q9H239 520 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 MCRIP1C9JLW8 97 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 SUSD5O60279 629 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 SLC35E2BP0CK96 405 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 RRADP55042 308 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 TAS2R30P59541 319 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 TAF9Q16594 264 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 SCML4Q8N228 414 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 ABHD11Q8NFV4 315 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 PGAP3Q96FM1 320 aaPredicted RBP12.37□□□□□ -0.43
NEK9-201ENST00000238616 PRSS38A1L453 326 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 CD1DP15813 335 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 PBX1P40424 430 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 MAT1AQ00266 395 aaKnown RBP12.37□□□□□ -0.43
NEK9-201ENST00000238616 MOGQ16653 247 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 YIF1BQ5BJH7 314 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 GLB1L2Q8IW92 636 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 GPR148Q8TDV2 347 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 CMSS1Q9BQ75 279 aaKnown RBP12.37□□□□□ -0.43
NEK9-201ENST00000238616 KCND1Q9NSA2 647 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.37□□□□□ -0.43
NEK9-201ENST00000238616 ACTL7AQ9Y615 435 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.37□□□□□ -0.433e-8■■■■□ 24.8
NEK9-201ENST00000238616 ZNF840PA6NDX5 716 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 RAB35Q15286 201 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 NAA40Q86UY6 237 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 BAGE3Q86Y29 109 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 BAGE2Q86Y30 109 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 OR5D18Q8NGL1 313 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 TLCD1Q96CP7 247 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 SLC35A3Q9Y2D2 325 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 FAM96BQ9Y3D0 163 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 ZNF169Q14929 603 aaPredicted RBP12.37□□□□□ -0.43
NEK9-201ENST00000238616 UBE2NLQ5JXB2 153 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 C10orf62Q5T681 223 aaPredicted RBP12.37□□□□□ -0.43
NEK9-201ENST00000238616 TANKQ92844 425 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 TAS2R16Q9NYV7 291 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 NKX6-3A6NJ46 265 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 FAM183AA6NL82 134 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 SLC16A7O60669 478 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 ICAM2P13598 275 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 HOXC5Q00444 222 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 NADSYN1Q6IA69 706 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 IRF2BP1Q8IU81 584 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 CPOQ8IVL8 374 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 OR5AS1Q8N127 324 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 ELMOD3Q96FG2 381 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 HRASLS5Q96KN8 279 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 RIMS3Q9UJD0 308 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 ZNF337Q9Y3M9 751 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 NCR1O76036 304 aa12.37□□□□□ -0.43
NEK9-201ENST00000238616 METTL11BQ5VVY1 283 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms