RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 CDCP1Q9H5V8 836 aa8.89□□□□□ -0.99
TTC1-201ENST00000231238 GPN2Q9H9Y4 310 aaPredicted RBP8.89□□□□□ -0.99
TTC1-201ENST00000231238 HHATLQ9HCP6 504 aa8.89□□□□□ -0.99
TTC1-201ENST00000231238 TVP23BQ9NYZ1 205 aa8.89□□□□□ -0.99
TTC1-201ENST00000231238 PPP4R1LQ9P1A2 415 aa8.89□□□□□ -0.99
TTC1-201ENST00000231238 RNF6Q9Y252 685 aa8.89□□□□□ -0.99
TTC1-201ENST00000231238 YARS2Q9Y2Z4 477 aaKnown RBP8.89□□□□□ -0.99
TTC1-201ENST00000231238 FRYLO94915 3013 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 A0A1W2PNU3 283 aaPredicted RBP8.88□□□□□ -0.99
TTC1-201ENST00000231238 CCDC160A6NGH7 325 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 ENO4A6NNW6 628 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 SLC1A7O00341 560 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 CDC40O60508 579 aaKnown RBP eCLIP8.88□□□□□ -0.99
TTC1-201ENST00000231238 HCN1O60741 890 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 RCBTB2O95199 551 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 NTN1O95631 604 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 CELA2AP08217 269 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 IGFBP1P08833 259 aaPredicted RBP8.88□□□□□ -0.99
TTC1-201ENST00000231238 CCDC159P0C7I6 412 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 CEACAM1P13688 526 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 SOX3P41225 446 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 RPL5P46777 297 aaKnown RBP8.88□□□□□ -0.99
TTC1-201ENST00000231238 OMPP47874 163 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 P2RX1P51575 399 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 NR1H2P55055 460 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 SNAPC1Q16533 368 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 CTU2Q2VPK5 515 aaKnown RBP8.88□□□□□ -0.99
TTC1-201ENST00000231238 FNDC7Q5VTL7 733 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 RPL13AP3Q6NVV1 102 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 IL20RBQ6UXL0 311 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 APOOLQ6UXV4 268 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 OAFQ86UD1 273 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 ENTHD1Q8IYW4 607 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 IQCF1Q8N6M8 205 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 AMER2Q8N7J2 671 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 FAM71CQ8NEG0 241 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 TMEM234Q8WY98 164 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 NACC2Q96BF6 587 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 SPACA9Q96E40 222 aaPredicted RBP8.88□□□□□ -0.99
TTC1-201ENST00000231238 SGTBQ96EQ0 304 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 IMMP1LQ96LU5 166 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 NODALQ96S42 347 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 CCNL2Q96S94 520 aaPredicted RBP8.88□□□□□ -0.99
TTC1-201ENST00000231238 PRSS27Q9BQR3 290 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 B3GNT4Q9C0J1 378 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 NDEL1Q9GZM8 345 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 DSN1Q9H410 356 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 EGLN3Q9H6Z9 239 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 HPF1Q9NWY4 346 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 P4HTMQ9NXG6 502 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 ABI3Q9P2A4 366 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 REV1Q9UBZ9 1251 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 POLR3KQ9Y2Y1 108 aaPredicted RBP8.88□□□□□ -0.99
TTC1-201ENST00000231238 CDH10Q9Y6N8 788 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 MUC6Q6W4X9 2439 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 WDFY4Q6ZS81 3184 aa8.88□□□□□ -0.99
TTC1-201ENST00000231238 SNTNA6NMZ2 147 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 M0R129 80 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 FADS1O60427 444 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 HIST1H2ABP04908 130 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 TACR3P29371 465 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 SLC1A3P43003 542 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 GIPRP48546 466 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 MASP1P48740 699 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 HLCSP50747 726 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 ZNF41P51814 821 aaPredicted RBP8.87□□□□□ -0.99
TTC1-201ENST00000231238 GABARAPL2P60520 117 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 TUBA4AP68366 448 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 PRKCDQ05655 676 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 COL28A1Q2UY09 1125 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 SLX4IPQ5VYV7 408 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 SLC6A19Q695T7 634 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 OR5M10Q6IEU7 315 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 WDR88Q6ZMY6 472 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 HIST3H2AQ7L7L0 130 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 MRGPREQ86SM8 312 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 MARCH9Q86YJ5 346 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 DND1Q8IYX4 353 aaKnown RBP8.87□□□□□ -0.99
TTC1-201ENST00000231238 OR2T33Q8NG76 320 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 OR10G3Q8NGC4 313 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 OR4K17Q8NGC6 315 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 HIST1H2ACQ93077 130 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 OTULINQ96BN8 352 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 C3orf49Q96BT1 292 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 SAMD8Q96LT4 415 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 IP6K3Q96PC2 410 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 IL4I1Q96RQ9 567 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 CCNB1IP1Q9NPC3 277 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 TUBA8Q9NY65 449 aaPredicted RBP8.87□□□□□ -0.99
TTC1-201ENST00000231238 TAS2R10Q9NYW0 307 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 AASSQ9UDR5 926 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 TEKT2Q9UIF3 430 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 ADAM30Q9UKF2 790 aa8.87□□□□□ -0.99
TTC1-201ENST00000231238 ZFHX2Q9C0A1 2572 aaPredicted RBP8.87□□□□□ -0.99
TTC1-201ENST00000231238 CUL9Q8IWT3 2517 aa8.86□□□□□ -0.99
TTC1-201ENST00000231238 A0A087WUJ7 227 aa8.86□□□□□ -0.99
TTC1-201ENST00000231238 LOC101059948A0A1B0GTJ6 334 aa8.86□□□□□ -0.99
TTC1-201ENST00000231238 DPPA5A6NC42 116 aa8.86□□□□□ -0.99
TTC1-201ENST00000231238 XPNPEP2O43895 674 aa8.86□□□□□ -0.99
TTC1-201ENST00000231238 NADKO95544 446 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms