RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 NELFAQ9H3P2 528 aa17.14■□□□□ 0.33
CLIP2-201ENST00000223398 MAST2Q6P0Q8 1798 aa17.14■□□□□ 0.33
CLIP2-201ENST00000223398 NOVA1P51513 510 aaKnown RBP17.14■□□□□ 0.33
CLIP2-201ENST00000223398 GPR139Q6DWJ6 353 aa17.14■□□□□ 0.33
CLIP2-201ENST00000223398 Q6ZPB1 254 aaPredicted RBP17.14■□□□□ 0.33
CLIP2-201ENST00000223398 DPY19L4Q7Z388 723 aa17.14■□□□□ 0.33
CLIP2-201ENST00000223398 ZDHHC11BP0C7U3 371 aa17.14■□□□□ 0.33
CLIP2-201ENST00000223398 DRD5P21918 477 aa17.14■□□□□ 0.33
CLIP2-201ENST00000223398 ZNF81P51508 661 aa17.14■□□□□ 0.33
CLIP2-201ENST00000223398 SLC35A1P78382 337 aa17.14■□□□□ 0.33
CLIP2-201ENST00000223398 Q6ZSR9 355 aa17.14■□□□□ 0.33
CLIP2-201ENST00000223398 MEPCEQ7L2J0 689 aaKnown RBP17.14■□□□□ 0.33
CLIP2-201ENST00000223398 ST6GAL1P15907 406 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 PLAG1Q6DJT9 500 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 GRPEL2Q8TAA5 225 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 CD300LFQ8TDQ1 290 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 RPP25Q9BUL9 199 aaKnown RBP17.13■□□□□ 0.33
CLIP2-201ENST00000223398 B4GAT1O43505 415 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 GABBR2O75899 941 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 DEFB109BQ30KR1 87 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 PCGF3Q3KNV8 242 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 ACSM3Q53FZ2 586 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 TMEM244Q5VVB8 128 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 FAM83HQ6ZRV2 1179 aaPredicted RBP17.13■□□□□ 0.33
CLIP2-201ENST00000223398 OR8J2Q8NGG1 315 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 ZNF417Q8TAU3 575 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 SLC41A2Q96JW4 573 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 CPPED1Q9BRF8 314 aaPredicted RBP17.13■□□□□ 0.33
CLIP2-201ENST00000223398 PCDHGA1Q9Y5H4 931 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 CNTRLQ7Z7A1 2325 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 BORCS7-ASMTA0A0B4J1R7 106 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 UBFD1O14562 309 aaKnown RBP17.13■□□□□ 0.33
CLIP2-201ENST00000223398 CTSLP07711 333 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 EXT1Q16394 746 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 MKXQ8IYA7 352 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 GMPR2Q9P2T1 348 aaKnown RBP17.13■□□□□ 0.33
CLIP2-201ENST00000223398 A0A1B0GV50 99 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 A0A1W2PQL4 384 aaPredicted RBP17.13■□□□□ 0.33
CLIP2-201ENST00000223398 SLC5A10A0PJK1 596 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 F5H0A9 414 aaPredicted RBP17.13■□□□□ 0.33
CLIP2-201ENST00000223398 T-ENOLP0DO92 83 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 ARSBP15848 533 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 OTUD1Q5VV17 481 aaPredicted RBP17.13■□□□□ 0.33
CLIP2-201ENST00000223398 TMEM150AQ86TG1 271 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 SLC16A11Q8NCK7 471 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 HHLA2Q9UM44 414 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 YARS2Q9Y2Z4 477 aaKnown RBP17.13■□□□□ 0.33
CLIP2-201ENST00000223398 MYH7BA7E2Y1 1941 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 A0A1B0GUL6 1792 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 PRAMEF25A6NGN4 478 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 PLPP1O14494 284 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 PRSS3P35030 304 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 CCR5P51681 352 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 FAM109BQ6ICB4 259 aaPredicted RBP17.13■□□□□ 0.33
CLIP2-201ENST00000223398 PAPD5Q8NDF8 572 aaKnown RBP17.13■□□□□ 0.33
CLIP2-201ENST00000223398 TXNDC15Q96J42 360 aa17.13■□□□□ 0.33
CLIP2-201ENST00000223398 TIMM8BQ9Y5J9 83 aaPredicted RBP17.13■□□□□ 0.33
CLIP2-201ENST00000223398 ANKRD36CQ5JPF3 1778 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 TSPAN4O14817 238 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 SCGB2A1O75556 95 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 PTHP01270 115 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 TBRG1Q3YBR2 411 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 MTFR2Q6P444 385 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 TMEM163Q8TC26 289 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 LRRC20Q8TCA0 184 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 CREB3L1Q96BA8 519 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 TSPAN10Q9H1Z9 355 aaPredicted RBP17.12■□□□□ 0.33
CLIP2-201ENST00000223398 ZNF593O00488 134 aaPredicted RBP17.12■□□□□ 0.33
CLIP2-201ENST00000223398 TFF2Q03403 129 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 TMEM207Q6UWW9 146 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 TJP1Q07157 1748 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 LOC105369274A0A096LPK9 316 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 IDSB3KWA1 339 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 PLRG1O43660 514 aaKnown RBP17.12■□□□□ 0.33
CLIP2-201ENST00000223398 YRDCQ86U90 279 aaKnown RBP17.12■□□□□ 0.33
CLIP2-201ENST00000223398 MISPQ8IVT2 679 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 OR4N4Q8N0Y3 316 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 GLYATL2Q8WU03 294 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 P2RY12Q9H244 342 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 SCN9AQ15858 1988 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 LRIT2A6NDA9 550 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 TRAPPC2LH3BP13 241 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 GFERP55789 205 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 ACTBP60709 375 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 ACTG1P63261 375 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 MZT1Q08AG7 82 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 TRMT12Q53H54 448 aaKnown RBP17.12■□□□□ 0.33
CLIP2-201ENST00000223398 COQ8AQ8NI60 647 aa17.12■□□□□ 0.33
CLIP2-201ENST00000223398 A6NIN4 97 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 AGAP5A6NIR3 686 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 GASTP01350 101 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 KEAP1Q14145 624 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 CENPSQ8N2Z9 138 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 COG8Q96MW5 612 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 SSX5O60225 188 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 SPEM2Q0P670 501 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 ASCC1Q8N9N2 400 aaKnown RBP17.11■□□□□ 0.33
CLIP2-201ENST00000223398 SYT3Q9BQG1 590 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 CACNG6Q9BXT2 260 aa17.11■□□□□ 0.33
CLIP2-201ENST00000223398 CCDC86Q9H6F5 360 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms