RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 FUT5Q11128 374 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 SWI5Q1ZZU3 235 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 C16orf62Q7Z3J2 963 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 LSRQ86X29 649 aaPredicted RBP13.8□□□□□ -0.2
NME3-201ENST00000219302 ARIH2OSQ8N7S6 290 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 OR8J2Q8NGG1 315 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 ZNF563Q8TA94 476 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 XAGE5Q8WWM1 108 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 RAB8BQ92930 207 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 EXOSC3Q9NQT5 275 aaKnown RBP13.8□□□□□ -0.2
NME3-201ENST00000219302 SLC17A5Q9NRA2 495 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 SLC7A10Q9NS82 523 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 TMEM181Q9P2C4 612 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 LPAR3Q9UBY5 353 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 DCTN4Q9UJW0 460 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 WDR45Q9Y484 360 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 FLVCR1Q9Y5Y0 555 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 ATP23Q9Y6H3 246 aa13.8□□□□□ -0.2
NME3-201ENST00000219302 PRAMEF27A3QJZ7 478 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 CLDN24A6NM45 220 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 LMX1BO60663 402 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 AGR2O95994 175 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 CSF3P09919 207 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 IMPDH2P12268 514 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 MAGEA8P43361 318 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 OR2B6P58173 313 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 KCNJ10P78508 379 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 LSM11P83369 360 aaKnown RBP eCLIP13.79□□□□□ -0.2
NME3-201ENST00000219302 CHRNB3Q05901 458 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 SLC17A1Q14916 467 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 C1QTNF12Q5T7M4 302 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 FRRS1Q6ZNA5 592 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 C17orf78Q8N4C9 275 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 C1orf162Q8NEQ5 155 aaPredicted RBP13.79□□□□□ -0.2
NME3-201ENST00000219302 TCP10LQ8TDR4 215 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 ROPN1LQ96C74 230 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 SHARPINQ9H0F6 387 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 FKRPQ9H9S5 495 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 PARPBPQ9NWS1 579 aa13.79□□□□□ -0.2
NME3-201ENST00000219302 TLDC2A0PJX2 215 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 SPAG7O75391 227 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 BMP4P12644 408 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 ZNF16P17020 682 aaPredicted RBP13.78□□□□□ -0.2
NME3-201ENST00000219302 CCNA2P20248 432 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 UQCRC2P22695 453 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 IDH2P48735 452 aaKnown RBP13.78□□□□□ -0.2
NME3-201ENST00000219302 MAD2L1Q13257 205 aaPredicted RBP13.78□□□□□ -0.2
NME3-201ENST00000219302 SMU1Q2TAY7 513 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 TSPO2Q5TGU0 170 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 C9orf135Q5VTT2 229 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 SAXO2Q658L1 398 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 TNFAIP8L2Q6P589 184 aaPredicted RBP13.78□□□□□ -0.2
NME3-201ENST00000219302 HMGN2P46Q86SG4 172 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 OR4A15Q8NGL6 344 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 CNOT9Q92600 299 aaKnown RBP13.78□□□□□ -0.2
NME3-201ENST00000219302 BOD1Q96IK1 185 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.78□□□□□ -0.2
NME3-201ENST00000219302 NOP53Q9NZM5 478 aaKnown RBP13.78□□□□□ -0.2
NME3-201ENST00000219302 OSGIN1Q9UJX0 560 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 PCDHGB4Q9UN71 923 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 AMDHD2Q9Y303 409 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 PMF1-BGLAPU3KQ54 211 aa13.78□□□□□ -0.2
NME3-201ENST00000219302 TMED7-TICAM2A0A0A6YYA0 188 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 PRSS51A0A1B0GVH4 220 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 SLC35F4A4IF30 521 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 ATP6V1G2-DDX39BF2Z307 99 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 AP3D1O14617 1153 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 ZNF208O43345 1280 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 EIF1BO60739 113 aaKnown RBP13.77□□□□□ -0.21
NME3-201ENST00000219302 C1QCP02747 245 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 BPGMP07738 259 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 IGFBP5P24593 272 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 HTR3AP46098 478 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 GZMKP49863 264 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 SLC35A1P78382 337 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 ATAD3BQ5T9A4 648 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 CASP12Q6UXS9 341 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 ANKRD46Q86W74 232 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 ARFGAP2Q8N6H7 521 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 ZIC4Q8N9L1 334 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 PMM1Q92871 262 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 ZIM3Q96PE6 472 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 AKTIPQ9H8T0 292 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 UPB1Q9UBR1 384 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 SLC9A8Q9Y2E8 581 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 TMED7Q9Y3B3 224 aa13.77□□□□□ -0.21
NME3-201ENST00000219302 TMEM72A0PK05 275 aa13.76□□□□□ -0.21
NME3-201ENST00000219302 ZC3H12DA2A288 527 aaKnown RBP13.76□□□□□ -0.21
NME3-201ENST00000219302 CPSF4O95639 269 aaKnown RBP13.76□□□□□ -0.21
NME3-201ENST00000219302 NUDT17P0C025 328 aa13.76□□□□□ -0.21
NME3-201ENST00000219302 CREB1P16220 341 aa13.76□□□□□ -0.21
NME3-201ENST00000219302 MPGP29372 298 aa13.76□□□□□ -0.21
NME3-201ENST00000219302 NR4A2P43354 598 aa13.76□□□□□ -0.21
NME3-201ENST00000219302 PRPS1P60891 318 aa13.76□□□□□ -0.21
NME3-201ENST00000219302 TGFBR3Q03167 851 aa13.76□□□□□ -0.21
NME3-201ENST00000219302 CASP8Q14790 479 aa13.76□□□□□ -0.21
NME3-201ENST00000219302 RIBC1Q8N443 379 aaPredicted RBP13.76□□□□□ -0.21
NME3-201ENST00000219302 TMEM45BQ96B21 275 aa13.76□□□□□ -0.21
NME3-201ENST00000219302 NEURL3Q96EH8 262 aa13.76□□□□□ -0.21
NME3-201ENST00000219302 NAA11Q9BSU3 229 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms