RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 MIPOL1Q8TD10 442 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 SMAP2Q8WU79 429 aaPredicted RBP13.27□□□□□ -0.29
UPK3A-201ENST00000216211 TMEM234Q8WY98 164 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 BTBD10Q9BSF8 475 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 CTPS2Q9NRF8 586 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 WDR45Q9Y484 360 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 MAGED1Q9Y5V3 778 aaPredicted RBP13.27□□□□□ -0.29
UPK3A-201ENST00000216211 CSPG4Q6UVK1 2322 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 PRSS51A0A1B0GVH4 220 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 ZNF724A8MTY0 619 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 H0YHG0 523 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 OVOL3O00110 214 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 AGR2O95994 175 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 C1QCP02747 245 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 TFPIP10646 304 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 IGHV1-2P23083 117 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 HIVEP2P31629 2446 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 RYKP34925 604 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 MNAT1P51948 309 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 CSNK2A1P68400 391 aaPredicted RBP13.26□□□□□ -0.29
UPK3A-201ENST00000216211 CHD3Q12873 2000 aaKnown RBP13.26□□□□□ -0.29
UPK3A-201ENST00000216211 PPA1Q15181 289 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 SPANXN4Q5MJ08 99 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 ATAD3BQ5T9A4 648 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 ANXA8L1Q5VT79 327 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 SAXO2Q658L1 398 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 NXNQ6DKJ4 435 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 ABLIM2Q6H8Q1 611 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 FRRS1Q6ZNA5 592 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 ZNF100Q8IYN0 542 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 MAPK1IP1LQ8NDC0 245 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 FAM71CQ8NEG0 241 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 VPS37AQ8NEZ2 397 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 TESCQ96BS2 214 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 ROPN1LQ96C74 230 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 ZG16BQ96DA0 208 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 CMTM5Q96DZ9 223 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 TRMT61AQ96FX7 289 aaKnown RBP13.26□□□□□ -0.29
UPK3A-201ENST00000216211 RAB3IPQ96QF0 476 aaPredicted RBP13.26□□□□□ -0.29
UPK3A-201ENST00000216211 USB1Q9BQ65 265 aaKnown RBP13.26□□□□□ -0.29
UPK3A-201ENST00000216211 C1orf21Q9H246 121 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 SLC35A3Q9Y2D2 325 aa13.26□□□□□ -0.29
UPK3A-201ENST00000216211 A0A1W2PP18 115 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 PRAMEF27A3QJZ7 478 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 CLDN24A6NM45 220 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 ANKRD28O15084 1053 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 LBPP18428 481 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 CHI3L1P36222 383 aaPredicted RBP13.25□□□□□ -0.29
UPK3A-201ENST00000216211 APOBEC1P41238 236 aaKnown RBP13.25□□□□□ -0.29
UPK3A-201ENST00000216211 KHKP50053 298 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 ATP4BP51164 291 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 NME5P56597 212 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 IRX1P78414 480 aaPredicted RBP13.25□□□□□ -0.29
UPK3A-201ENST00000216211 PPP2R2BQ00005 443 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 PLAURQ03405 335 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 FAPQ12884 760 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 VEZF1Q14119 521 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 CLEC12BQ2HXU8 276 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 GPAT3Q53EU6 434 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 RINLQ6ZS11 566 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 GALNT5Q7Z7M9 940 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 SLC25A43Q8WUT9 341 aaPredicted RBP13.25□□□□□ -0.29
UPK3A-201ENST00000216211 GTPBP3Q969Y2 492 aaKnown RBP13.25□□□□□ -0.29
UPK3A-201ENST00000216211 NEURL3Q96EH8 262 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 ARL5BQ96KC2 179 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 SLC35A5Q9BS91 424 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 TRIM2Q9C040 744 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 SAP130Q9H0E3 1048 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 POLE3Q9NRF9 147 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 TAS2R1Q9NYW7 299 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 CHRNA9Q9UGM1 479 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 LIPT1Q9Y234 373 aa13.25□□□□□ -0.29
UPK3A-201ENST00000216211 JMJD1CQ15652 2540 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 HEATR1Q9H583 2144 aaKnown RBP13.24□□□□□ -0.29
UPK3A-201ENST00000216211 KIAA1324LA8MWY0 1029 aaPredicted RBP13.24□□□□□ -0.29
UPK3A-201ENST00000216211 B2RBV5 119 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 RNF223E7ERA6 249 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 RAMP1O60894 148 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 IGHV3-9P01782 118 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 GUSBP08236 651 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 GGT1P19440 569 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 CCNA2P20248 432 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 COX5AP20674 150 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 CLNS1AP54105 237 aaKnown RBP13.24□□□□□ -0.29
UPK3A-201ENST00000216211 CHRNEQ04844 493 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 SQLEQ14534 574 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 PGGHGQ32M88 737 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 FAM174BQ3ZCQ3 159 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 ZNF433Q8N7K0 673 aaPredicted RBP13.24□□□□□ -0.29
UPK3A-201ENST00000216211 MUCL1Q96DR8 90 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 TEX37Q96LM6 180 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 OR11A1Q9GZK7 315 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.24□□□□□ -0.29
UPK3A-201ENST00000216211 NPAP1Q9NZP6 1156 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 EMC3Q9P0I2 261 aa13.24□□□□□ -0.29
UPK3A-201ENST00000216211 NOSIPQ9Y314 301 aaKnown RBP13.24□□□□□ -0.29
UPK3A-201ENST00000216211 SPIN1Q9Y657 262 aaPredicted RBP13.24□□□□□ -0.29
UPK3A-201ENST00000216211 IGKV3D-15A0A087WSY6 115 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 ZNF716A6NP11 495 aa13.23□□□□□ -0.29
UPK3A-201ENST00000216211 SHISA9B4DS77 424 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms