RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 C12orf10Q9HB07 376 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 MRPL22Q9NWU5 206 aaKnown RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 ZNF840PA6NDX5 716 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 FAM155AB1AL88 458 aaPredicted RBP9.77□□□□□ -0.84
VCL-201ENST00000211998 RNASET2O00584 256 aaKnown RBP9.77□□□□□ -0.84
VCL-201ENST00000211998 DUX1O43812 170 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 GYPBP06028 91 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 GABRB1P18505 474 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 TAS2R38P59533 333 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 SELENOVP59797 346 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 SNRPEP62304 92 aaKnown RBP9.77□□□□□ -0.84
VCL-201ENST00000211998 TNK1Q13470 666 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 TMEM35AQ53FP2 167 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 SDR9C7Q8NEX9 313 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 OR5M3Q8NGP4 307 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 RNF128Q8TEB7 428 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 BORCS7Q96B45 105 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 PGAM5Q96HS1 289 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 C8orf33Q9H7E9 229 aaPredicted RBP9.77□□□□□ -0.84
VCL-201ENST00000211998 PDE7BQ9NP56 450 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 GABRQQ9UN88 632 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 DIMT1Q9UNQ2 313 aaKnown RBP9.77□□□□□ -0.84
VCL-201ENST00000211998 PEAK1Q9H792 1746 aa9.77□□□□□ -0.84
VCL-201ENST00000211998 CDHR4A6H8M9 788 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 FRS3O43559 492 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 PLP2Q04941 152 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 C15orf39Q6ZRI6 1047 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 CDH26Q8IXH8 852 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 KLHDC8BQ8IXV7 354 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 SEMA6DQ8NFY4 1073 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 WDR77Q9BQA1 342 aaPredicted RBP9.77□□□□□ -0.85
VCL-201ENST00000211998 WASH4PA8MWX3 477 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 GPR32O75388 356 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 CSF3P09919 207 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 DRD2P14416 443 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 ELK1P19419 428 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 POU3F4P49335 361 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 TBPL1P62380 186 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 MRPL49Q13405 166 aaKnown RBP9.77□□□□□ -0.85
VCL-201ENST00000211998 ZNF239Q16600 458 aaKnown RBP9.77□□□□□ -0.85
VCL-201ENST00000211998 C2orf76Q3KRA6 126 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 KIAA0319Q5VV43 1072 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 SLC16A13Q7RTY0 426 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 NLGN4XQ8N0W4 816 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 DAZLQ92904 295 aaKnown RBP9.77□□□□□ -0.85
VCL-201ENST00000211998 FBXW5Q969U6 566 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 ZNF689Q96CS4 500 aaPredicted RBP9.77□□□□□ -0.85
VCL-201ENST00000211998 LIN7BQ9HAP6 207 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 EXO1Q9UQ84 846 aaKnown RBP9.77□□□□□ -0.85
VCL-201ENST00000211998 COL2A1P02458 1487 aaPredicted RBP9.77□□□□□ -0.85
VCL-201ENST00000211998 MYH7P12883 1935 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 TRBV4-1A0A0J9YWV2 114 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 TRDV1A0A1B0GX56 115 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 IQCF3P0C7M6 154 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 FBLP22087 321 aaKnown RBP9.77□□□□□ -0.85
VCL-201ENST00000211998 CD80P33681 288 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 RAB13P51153 203 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 MRPS34P82930 218 aaKnown RBP9.77□□□□□ -0.85
VCL-201ENST00000211998 DHCR24Q15392 516 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 VAMP3Q15836 100 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 PGGHGQ32M88 737 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 COL13A1Q5TAT6 717 aaPredicted RBP9.77□□□□□ -0.85
VCL-201ENST00000211998 PRSS45Q7RTY3 260 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 MR1Q95460 341 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 SLCO4A1Q96BD0 722 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 CPPED1Q9BRF8 314 aaPredicted RBP9.77□□□□□ -0.85
VCL-201ENST00000211998 MED18Q9BUE0 208 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 TMEM121BQ9BXQ6 578 aaPredicted RBP9.77□□□□□ -0.85
VCL-201ENST00000211998 EGLN3Q9H6Z9 239 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 SPACA1Q9HBV2 294 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 CREBZFQ9NS37 354 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 SEMA4GQ9NTN9 838 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 ATXN7L1Q9ULK2 861 aaPredicted RBP9.77□□□□□ -0.85
VCL-201ENST00000211998 RHBDD3Q9Y3P4 386 aa9.77□□□□□ -0.85
VCL-201ENST00000211998 NDUFB2O95178 105 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 PTAFRP25105 342 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 UNC5DQ6UXZ4 953 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 ZNF440Q8IYI8 595 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 ANKLE1Q8NAG6 615 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 OR13C9Q8NGT0 318 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 YIPF6Q96EC8 236 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 SDSLQ96GA7 329 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 PRRC1Q96M27 445 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 OPA3Q9H6K4 179 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 ACSS1Q9NUB1 689 aaPredicted RBP9.76□□□□□ -0.85
VCL-201ENST00000211998 B4GALT7Q9UBV7 327 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 GPR34Q9UPC5 381 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 SLC7A11Q9UPY5 501 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 KIAA0355O15063 1070 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 STC2O76061 302 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 RNH1P13489 461 aaKnown RBP9.76□□□□□ -0.85
VCL-201ENST00000211998 ARL6IP1Q15041 203 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 RANBP10Q6VN20 620 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 IGSF8Q969P0 613 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 ZNF681Q96N22 645 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 SGIP1Q9BQI5 828 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 PIGQQ9BRB3 760 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 ACPTQ9BZG2 426 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 GPR62Q9BZJ7 368 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 CRLF2Q9HC73 371 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms