RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 WDFY2Q96P53 400 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 KLHDC3Q9BQ90 382 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 ZNF224Q9NZL3 707 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 ZMIZ1Q9ULJ6 1067 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 RCE1Q9Y256 329 aa13.91□□□□□ -0.18
EFNB1-201ENST00000204961 NUPL2O15504 423 aaKnown RBP13.9□□□□□ -0.18
EFNB1-201ENST00000204961 FMO6PO60774 539 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 CSN2P05814 226 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 TEKQ02763 1124 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 DECR1Q16698 335 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 AMZ1Q400G9 498 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 TOR2AQ5JU69 321 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 FCRLAQ7L513 359 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 ZNF687Q8N1G0 1237 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 OR8S1Q8NH09 359 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 SLC25A36Q96CQ1 311 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 SEC22CQ9BRL7 303 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 CACNG2Q9Y698 323 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 COL6A3P12111 3177 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 KIF26BQ2KJY2 2108 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 TFP02787 698 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 HPGDP15428 266 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 ZNF250P15622 560 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 C5AR1P21730 350 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 AHCYP23526 432 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 NDUFS1P28331 727 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 GDI2P50395 445 aaKnown RBP13.9□□□□□ -0.18
EFNB1-201ENST00000204961 DLX2Q07687 328 aaPredicted RBP13.9□□□□□ -0.18
EFNB1-201ENST00000204961 KDM8Q8N371 416 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 CSNK1A1LQ8N752 337 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 C10orf90Q96M02 699 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 ZMAT3Q9HA38 289 aaKnown RBP13.9□□□□□ -0.18
EFNB1-201ENST00000204961 CALML5Q9NZT1 146 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 FBXO9Q9UK97 447 aaPredicted RBP13.9□□□□□ -0.18
EFNB1-201ENST00000204961 ADAM30Q9UKF2 790 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 STK25O00506 426 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 WNT1P04628 370 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 LIPCP11150 499 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 MYF5P13349 255 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 ATP12AP54707 1039 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 EFNB1P98172 346 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 OR11H7Q8NGC8 314 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 RAB7BQ96AH8 199 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 Q96M85 177 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 NOX4Q9NPH5 578 aa13.9□□□□□ -0.18
EFNB1-201ENST00000204961 CARNS1A5YM72 827 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 CHURC1-FNTBB4DL54 471 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 GMDSO60547 372 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 SDC3O75056 442 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 KHDRBS3O75525 346 aaKnown RBP13.89□□□□□ -0.19
EFNB1-201ENST00000204961 DHFRP00374 187 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 ERGP11308 486 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 ZNF3P17036 446 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 ZNF85Q03923 595 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 SNTB2Q13425 540 aaKnown RBP13.89□□□□□ -0.19
EFNB1-201ENST00000204961 ZNF619Q8N2I2 560 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 PPP1R14AQ96A00 147 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 LMAN2LQ9H0V9 348 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 ADAM29Q9UKF5 820 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 COPS3Q9UNS2 423 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 FREM3P0C091 2139 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 C2orf72A6NCS6 295 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 HPXP02790 462 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 OPN1LWP04000 364 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 ITPKBP27987 946 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 RPS5P46782 204 aaKnown RBP13.89□□□□□ -0.19
EFNB1-201ENST00000204961 ITPRIPL2Q3MIP1 535 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 Q6ZSR6 202 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 UBE2Q1Q7Z7E8 422 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 SPERTQ8NA61 448 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 OR2T35Q8NGX2 323 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 OR2A5Q96R48 311 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 ERVK-19Q9WJR5 959 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 TMEM72A0PK05 275 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 RLN1P04808 185 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 TMIGD3P0DMS9 266 aaPredicted RBP13.89□□□□□ -0.19
EFNB1-201ENST00000204961 CTSEP14091 401 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 ST6GAL1P15907 406 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 AQP2P41181 271 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 MLLT3P42568 568 aaPredicted RBP13.89□□□□□ -0.19
EFNB1-201ENST00000204961 VEGFCP49767 419 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 SF3A2Q15428 464 aaKnown RBP13.89□□□□□ -0.19
EFNB1-201ENST00000204961 CACNA1EQ15878 2313 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 KIRREL2Q6UWL6 708 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 BPHLQ86WA6 291 aaPredicted RBP13.89□□□□□ -0.19
EFNB1-201ENST00000204961 PAQR7Q86WK9 346 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 THAP3Q8WTV1 239 aaPredicted RBP13.89□□□□□ -0.19
EFNB1-201ENST00000204961 GIMAP1Q8WWP7 306 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 GAL3ST3Q96A11 431 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 TIMP4Q99727 224 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 ZNF649Q9BS31 505 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 GON7Q9BXV9 100 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 TPSD1Q9BZJ3 242 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 MAFFQ9ULX9 164 aa13.89□□□□□ -0.19
EFNB1-201ENST00000204961 RCBTB2O95199 551 aa13.88□□□□□ -0.19
EFNB1-201ENST00000204961 IGKV1D-16P01601 117 aa13.88□□□□□ -0.19
EFNB1-201ENST00000204961 PRKAR1BP31321 381 aa13.88□□□□□ -0.19
EFNB1-201ENST00000204961 TMEM255AQ5JRV8 349 aa13.88□□□□□ -0.19
EFNB1-201ENST00000204961 STPG1Q5TH74 334 aa13.88□□□□□ -0.19
EFNB1-201ENST00000204961 FCRL6Q6DN72 434 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms