RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 CSF2RBP32927 897 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 MTNR1BP49286 362 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 SCN1BQ07699 218 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 SKP2Q13309 424 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 CD226Q15762 336 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF79Q15937 498 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 FAAH2Q6GMR7 532 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 DESI1Q6ICB0 168 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 XKRXQ6PP77 449 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 CCBE1Q6UXH8 406 aaPredicted RBP7.57□□□□□ -1.2
VAMP3-201ENST00000054666 SLC29A4Q7RTT9 530 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 GDPD1Q8N9F7 314 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 SLC41A2Q96JW4 573 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 DPYSL5Q9BPU6 564 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 TMEM43Q9BTV4 400 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 DUSP15Q9H1R2 295 aaPredicted RBP7.57□□□□□ -1.2
VAMP3-201ENST00000054666 ERVMER34-1Q9H9K5 563 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 ENAMQ9NRM1 1142 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 COMMD3Q9UBI1 195 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 NOX1Q9Y5S8 564 aa7.57□□□□□ -1.2
VAMP3-201ENST00000054666 TCRBV16S1A1N1A0A5B0 115 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 H3BMH7 237 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 J3QLW9 94 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 HYAL3O43820 417 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 IDH3BO43837 385 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 SERPINI2O75830 405 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 IGKV3-11P04433 115 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 IL7P13232 177 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF19P17023 458 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 EIF2B2P49770 351 aaKnown RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 CAV3P56539 151 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 PLCXD2Q0VAA5 305 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 FHL1Q13642 323 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 PON3Q15166 354 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 NSDHLQ15738 373 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 PYDC2Q56P42 97 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 SLC35D3Q5M8T2 416 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 FNDC7Q5VTL7 733 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 VASNQ6EMK4 673 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 JAZF1Q86VZ6 243 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF321PQ8N8H1 164 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 FAM181AQ8N9Y4 354 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF721Q8TF20 911 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ACOT12Q8WYK0 555 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 HPS1Q92902 700 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 CLDN23Q96B33 292 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ZMYND19Q96E35 227 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ADOQ96SZ5 270 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 MIXL1Q9H2W2 232 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 SYNDIG1Q9H7V2 258 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 NANSQ9NR45 359 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 KLHL1Q9NR64 748 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 FBXL4Q9UKA2 621 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 SRPK3Q9UPE1 567 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 SLC6A5Q9Y345 797 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ADAM18Q9Y3Q7 739 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 COL5A1P20908 1838 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 PCDH15Q96QU1 1955 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 HEATR5AQ86XA9 2040 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 LRRN3E7EW58 273 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ARPC3O15145 178 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 PLPP2O43688 288 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 PRKNO60260 465 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ICOSLGO75144 302 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 DDAH2O95865 285 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 SERPINA3P01011 423 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 OR2T7P0C7T2 308 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 FOLR1P15328 257 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 RPS4XP62701 263 aaKnown RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 DAB2P98082 770 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF85Q03923 595 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ZP2Q05996 745 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 SLC3A1Q07837 685 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 GGTLC2Q14390 218 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 EBPQ15125 230 aaKnown RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ISXQ2M1V0 245 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 GLYR1Q49A26 553 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ZMAT1Q5H9K5 638 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF362Q5T0B9 420 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 PRAMEF17Q5VTA0 474 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 C1orf189Q5VU69 101 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 TRIQKQ629K1 86 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 WDR74Q6RFH5 385 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 VASH1Q7L8A9 365 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ATG4DQ86TL0 474 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 AKAP14Q86UN6 197 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 SLC35F2Q8IXU6 374 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 PRSS58Q8IYP2 241 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 PRR22Q8IZ63 422 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 LRRC17Q8N6Y2 441 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 OR6K6Q8NGW6 343 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 OR2T27Q8NH04 317 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 TXNDC15Q96J42 360 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 DCLRE1CQ96SD1 692 aaKnown RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 GPX7Q96SL4 187 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ELF4Q99607 663 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 TBL1XR1Q9BZK7 514 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 LRRN3Q9H3W5 708 aa7.56□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF768Q9H5H4 540 aaKnown RBP7.56□□□□□ -1.2
VAMP3-201ENST00000054666 C12orf10Q9HB07 376 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms