RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 SLC44A3Q8N4M1 653 aa9.83□□□□□ -0.84
USP28-201ENST00000003302 MFSD9Q8NBP5 474 aa9.83□□□□□ -0.84
USP28-201ENST00000003302 DACT3Q96B18 629 aaPredicted RBP9.83□□□□□ -0.84
USP28-201ENST00000003302 LRIT1Q9P2V4 623 aa9.83□□□□□ -0.84
USP28-201ENST00000003302 POLHQ9Y253 713 aa9.83□□□□□ -0.84
USP28-201ENST00000003302 RCE1Q9Y256 329 aa9.83□□□□□ -0.84
USP28-201ENST00000003302 IER3IP1Q9Y5U9 82 aa9.83□□□□□ -0.84
USP28-201ENST00000003302 PRR23D1E9PI22 279 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 H0YGG7 62 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 ORC5O43913 435 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 RDH16O75452 317 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 PRR23D2P0DMB1 279 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 ARF3P61204 181 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 BTG2P78543 158 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 PDGFRLQ15198 375 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 ARHGAP11BQ3KRB8 267 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 NATD1Q8N6N6 113 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 ZNF433Q8N7K0 673 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 OR4K14Q8NGD5 310 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 OR9A4Q8NGU2 314 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 HAVCR2Q8TDQ0 301 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 RFKQ969G6 155 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 KIAA1143Q96AT1 154 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 BMFQ96LC9 184 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 ERMAPQ96PL5 475 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 DDOQ99489 341 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 ELF4Q99607 663 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 NT5DC2Q9H857 520 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 ELF5Q9UKW6 265 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 ACSL5Q9ULC5 683 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 MAFFQ9ULX9 164 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 TMEM184BQ9Y519 407 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 SIX6O95475 246 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 CRYZL1O95825 349 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 NPR2P20594 1047 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 DCTDP32321 178 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 KIR2DL1P43626 348 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 PER3P56645 1201 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 MAB21L1Q13394 359 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 C1orf61Q13536 156 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 GSG1Q2KHT4 349 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 TMEM35AQ53FP2 167 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 ZBTB37Q5TC79 503 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 MTSS1LQ765P7 747 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 ASPGQ86U10 573 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 ZNF321PQ8N8H1 164 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 WFIKKN2Q8TEU8 576 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 MYADMQ96S97 322 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 SPATA5L1Q9BVQ7 753 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 CACNG6Q9BXT2 260 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 MTHFD2LQ9H903 347 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 NOX4Q9NPH5 578 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 A0A1W2PQF6 199 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 RPS10-NUDT3A0A1W2PQS6 291 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 CYR61O00622 381 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 GPR171O14626 319 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 SLC9A3R1O14745 358 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 OR5F1O95221 314 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 UGT2B7P16662 529 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 ADRA2CP18825 462 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 SOX2P48431 317 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 RIN1Q13671 783 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 PRICKLE4Q2TBC4 344 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 C9orf50Q5SZB4 431 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 CBLN3Q6UW01 205 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 TEX261Q6UWH6 196 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 COX18Q8N8Q8 333 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 OR52R1Q8NGF1 315 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 OR6K6Q8NGW6 343 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 MOSPD2Q8NHP6 518 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 SFXN5Q8TD22 340 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 C17orf50Q8WW18 174 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 Q96M85 177 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 RBP7Q96R05 134 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 MS4A7Q9GZW8 240 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 OR10A4Q9H209 315 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 METTL17Q9H7H0 456 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 IL23AQ9NPF7 189 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 GNG8Q9UK08 70 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 U3KQ87 197 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 FER1L5A0AVI2 2057 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 TRAPPC13A5PLN9 417 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 ZFPL1O95159 310 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 RASGRP1O95267 797 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 NFATC1O95644 943 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 WNT11O96014 354 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 VASPP50552 380 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 POU6F2P78424 691 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 DLX2Q07687 328 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 ACSM1Q08AH1 577 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 GARNL3Q5VVW2 1013 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 SIGIRRQ6IA17 410 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 FAM199XQ6PEV8 388 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 LRRC28Q86X40 367 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 OR52I2Q8NH67 350 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 STK35Q8TDR2 534 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 ZNF431Q8TF32 576 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 ZNF764Q96H86 408 aaPredicted RBP9.82□□□□□ -0.84
USP28-201ENST00000003302 OR1F2PQ96R84 312 aa9.82□□□□□ -0.84
USP28-201ENST00000003302 SARGQ9BW04 601 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms