RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Slc43a1Q8BSM7 564 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Slc22a29Q8BWG6 551 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Poglut1Q8BYB9 392 aaKnown RBP15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Hpf1Q8CFE2 346 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Olfr683Q8VGV1 319 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Exosc4Q921I9 245 aaKnown RBP15.07■□□□□ 0
Trim28-201ENSMUST00000005705 UqcrbQ9D855 111 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Dnaja4Q9JMC3 397 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 SpastQ9QYY8 614 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Mamdc4A2AJA7 1228 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Ccdc149F6V035 524 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Olfr1360K9J6X0 313 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 RaxO35602 342 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Fcn2O70497 314 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 SnrpbP27048 231 aaKnown RBP15.07■□□□□ 0
Trim28-201ENSMUST00000005705 PtgirP43252 415 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 S100a1P56565 94 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Foxd3Q61060 465 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 DmknQ6P253 517 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Olfr1359Q7TQU5 313 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Olfr1349Q7TQV1 317 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Olfr684Q7TRN8 312 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Sfxn2Q925N2 322 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Krt88Q9CPR6 171 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Fam3bQ9D309 235 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Actl11Q9D5V1 1207 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Pfn3Q9DAD6 137 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 NpvfQ9ESQ8 188 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Kif26bQ7TNC6 2112 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Dcst2A0A140LIJ0 701 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Mpeg1A1L314 713 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Pgm2A2CEK3 580 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Gm13178B1AVU7 408 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Gm17067E9Q6S4 354 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Cldn34aG3UW52 211 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Cacng2O88602 323 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Irf1P15314 329 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Resp18P47939 175 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Acp5Q05117 327 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Xrcc1Q60596 631 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Gper1Q8BMP4 375 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Cep68Q8C0D9 733 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Gm11541Q8C4D8 108 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 ZxdcQ8C8V1 858 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 V1ra11Q8R2E6 318 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Vmn1r45Q8VIC7 318 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Rab28Q99KL7 221 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Rassf1Q99MK9 340 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Snapc3Q9D2C9 407 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Lman2Q9DBH5 358 aaKnown RBP15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Dgat2Q9DCV3 388 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 Tssc4Q9JHE7 317 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 NcdnQ9Z0E0 729 aa15.07■□□□□ 0
Trim28-201ENSMUST00000005705 TrdcA0A0G2JEU3 153 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Smpd5D6MZJ6 483 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Dcpp2E9PYC2 171 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Dcpp1L7N1X9 171 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 PhyhO35386 338 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Ube2e3P52483 207 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Cdh11P55288 796 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 FcamrQ2TB54 535 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Brf2Q3UAW9 420 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Tex261Q62302 196 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Slc22a13Q6A4L0 551 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Zfp82Q6P9Y7 530 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 DraxinQ6PAL1 343 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 SnupnQ80W37 358 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Gadl1Q80WP8 550 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Znf770Q8BIQ8 705 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Baiap2Q8BKX1 535 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 AgmoQ8BS35 447 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Wdfy2Q8BUB4 400 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Zfp709Q8VC29 727 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Tysnd1Q9DBA6 568 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 RetnlaQ9EP95 111 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Bco1Q9JJS6 566 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Srebf1Q9WTN3 1134 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 FryE9Q8I9 3020 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Vmn2r18E9Q280 788 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Pcdh1F7BJK1 1077 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Irs3O54718 495 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 FhitO89106 150 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Actr1aP61164 376 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Pitx2P97474 317 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Kiss1Q6Y4S4 130 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Olfr1031Q7TR87 336 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Slc38a9Q8BGD6 560 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Nars2Q8BGV0 477 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Znf592Q8BHZ4 1262 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Slc35c1Q8BLX4 363 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Actr1bQ8R5C5 376 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Olfr1232Q8VEX7 311 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Fmo4Q8VHG0 560 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Asic5Q9R0Y1 495 aa15.06■□□□□ 0
Trim28-201ENSMUST00000005705 Olfr228A0A1L1SR98 313 aa15.05■□□□□ 0
Trim28-201ENSMUST00000005705 Zbtb34A2ATY4 518 aa15.05■□□□□ 0
Trim28-201ENSMUST00000005705 Gm43720E0CXM8 267 aa15.05■□□□□ 0
Trim28-201ENSMUST00000005705 Vmn1r168K7N6B6 309 aa15.05■□□□□ 0
Trim28-201ENSMUST00000005705 Ppp1caP62137 330 aaKnown RBP15.05■□□□□ 0
Trim28-201ENSMUST00000005705 HbegfQ06186 208 aa15.05■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms