RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 CHST2Q9Y4C5 530 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 A0A0B4J2E0 115 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 A0A1B0GX12 115 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 C21orf140B9A014 251 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 CDK2AP1O14519 115 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 ZNF264O43296 627 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 RGS10O43665 173 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 REM1O75628 298 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 CEACAM4O75871 244 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 OR6B1O95007 311 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 PIPP12273 146 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-234ENST00000642041 MMP11P24347 488 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 IDH2P48735 452 aaKnown RBP15.72■□□□□ 0.11
PHGDH-234ENST00000642041 SLC9A3P48764 834 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 PER3P56645 1201 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 SLC26A5P58743 744 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 PLCXD2Q0VAA5 305 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 LAPTM4AQ15012 233 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 TESK1Q15569 626 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 MAPK14Q16539 360 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 TMEM201Q5SNT2 666 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 WBP2NLQ6ICG8 309 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 SPNS3Q6ZMD2 512 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 ZNF517Q6ZMY9 492 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-234ENST00000642041 ZNF614Q8N883 585 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 SLC38A9Q8NBW4 561 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 ZNF540Q8NDQ6 660 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 FAM71CQ8NEG0 241 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 OR52L1Q8NGH7 329 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 SLC22A8Q8TCC7 542 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 MR1Q95460 341 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 TSLPQ969D9 159 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 RFKQ969G6 155 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 NUDT9Q9BW91 350 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 SLC22A11Q9NSA0 550 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 RLIMQ9NVW2 624 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 DNAJB12Q9NXW2 375 aaKnown RBP15.72■□□□□ 0.11
PHGDH-234ENST00000642041 REV1Q9UBZ9 1251 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 PADI1Q9ULC6 663 aa15.72■□□□□ 0.11
PHGDH-234ENST00000642041 MYOCOSA0A1B0GUC4 107 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 CLCA1A8K7I4 914 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 ALG1L2C9J202 215 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 PRSS44E7EML9 344 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 PEX12O00623 359 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 TSPAN2O60636 221 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 LINGO3P0C6S8 592 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 MSX1P28360 303 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 OMPP47874 163 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 SUMO3P55854 103 aaPredicted RBP15.71■□□□□ 0.11
PHGDH-234ENST00000642041 RNF4P78317 190 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 SLC35A2P78381 396 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 CDK5Q00535 292 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 TMED1Q13445 227 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 SEC23BQ15437 767 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 C12orf73Q69YU5 71 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 ENTHD1Q8IYW4 607 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 ZNF441Q8N8Z8 693 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 SIMC1Q8NDZ2 872 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 BPIFB6Q8NFQ5 453 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 RNF31Q96EP0 1072 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 DTNBP1Q96EV8 351 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 MYCBPQ99417 103 aaPredicted RBP15.71■□□□□ 0.11
PHGDH-234ENST00000642041 NXF5Q9H1B4 397 aaKnown RBP15.71■□□□□ 0.11
PHGDH-234ENST00000642041 CTSFQ9UBX1 484 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 SLC7A7Q9UM01 511 aa15.71■□□□□ 0.11
PHGDH-234ENST00000642041 A0A1W2PQ72 361 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 ARGFXA6NJG6 315 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 TPST2O60704 377 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 HCN1O60741 890 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 FAM20BO75063 409 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 UTS2O95399 124 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 CYP4B1P13584 511 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 POU2F1P14859 743 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 PGCP20142 388 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 ELK4P28324 431 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 POLR2IP36954 125 aaKnown RBP15.7■□□□□ 0.1
PHGDH-234ENST00000642041 HTR3AP46098 478 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 RFX3P48380 749 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 NR0B1P51843 470 aaKnown RBP15.7■□□□□ 0.1
PHGDH-234ENST00000642041 ALG10BQ5I7T1 473 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 RNLSQ5VYX0 342 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 PAPD4Q6PIY7 484 aaKnown RBP15.7■□□□□ 0.1
PHGDH-234ENST00000642041 MRGPREQ86SM8 312 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 CISD2Q8N5K1 135 aaKnown RBP15.7■□□□□ 0.1
PHGDH-234ENST00000642041 M1APQ8TC57 530 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 BRIX1Q8TDN6 353 aaKnown RBP15.7■□□□□ 0.1
PHGDH-234ENST00000642041 CT55Q8WUE5 264 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 GAL3ST4Q96RP7 486 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 SPSB2Q99619 263 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 TMEM43Q9BTV4 400 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 RSPO3Q9BXY4 272 aaPredicted RBP15.7■□□□□ 0.1
PHGDH-234ENST00000642041 TBL1XR1Q9BZK7 514 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 SOX17Q9H6I2 414 aaPredicted RBP15.7■□□□□ 0.1
PHGDH-234ENST00000642041 KCNE5Q9UJ90 142 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 RNF6Q9Y252 685 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 CDH10Q9Y6N8 788 aa15.7■□□□□ 0.1
PHGDH-234ENST00000642041 A8MUA0 341 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 HRKO00198 91 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 ATXN8OSP0DMR3 200 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 FKBP2P26885 142 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms