RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 NPFFR2Q9Y5X5 522 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 TBC1D3DA0A087WVF3 549 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 TBC1D3IA0A087WXS9 549 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 TBC1D3LB9A6J9 549 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 WNT1P04628 370 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 TBC1D3HP0C7X1 549 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 PEPDP12955 493 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 TLX1P31314 330 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-233ENST00000642021 MMP15P51511 669 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 PPP2CBP62714 309 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 PPP2CAP67775 309 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 MGAT2Q10469 447 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 ENPP2Q13822 863 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 TRAM1Q15629 374 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 TBC1D3CQ6IPX1 549 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 TEX261Q6UWH6 196 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 DGAT2L6Q6ZPD8 337 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 TMEM151BQ8IW70 566 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 TBC1D3Q8IZP1 549 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-233ENST00000642021 SDR9C7Q8NEX9 313 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 OR6C4Q8NGE1 309 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 OR52E2Q8NGJ4 325 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 OR4K13Q8NH42 304 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 GCDHQ92947 438 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-233ENST00000642021 PELI1Q96FA3 418 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 DUSP22Q9NRW4 184 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 NUBP2Q9Y5Y2 271 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 U3KQ87 197 aa12.75□□□□□ -0.37
PHGDH-233ENST00000642021 A0A0B4J2E0 115 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 A0A1B0GWA3 101 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 A0A1B0GX12 115 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 LRRN3E7EW58 273 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 GNB5O14775 395 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 UBL3O95164 117 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 ZNF3P17036 446 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 POLR2CP19387 275 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-233ENST00000642021 DRD5P21918 477 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 NAA10P41227 235 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-233ENST00000642021 TAS2R43P59537 309 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 GSG1Q2KHT4 349 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 ESCO2Q56NI9 601 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 SDE2Q6IQ49 451 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 MS4A15Q8N5U1 240 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 CDRT4Q8N9R6 151 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 TEX19Q8NA77 164 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 ZNF680Q8NEM1 530 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 ANGPTL6Q8NI99 470 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 TTC9Q92623 222 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 BADQ92934 168 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 TSACCQ96A04 125 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-233ENST00000642021 SCARF2Q96GP6 870 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-233ENST00000642021 OR2M4Q96R27 311 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 PDCD1LG2Q9BQ51 273 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.74□□□□□ -0.37
PHGDH-233ENST00000642021 LRRN3Q9H3W5 708 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 AUNIPQ9H7T9 357 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 EMC7Q9NPA0 242 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 HAO2Q9NYQ3 351 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 MRPL15Q9P015 296 aaKnown RBP12.74□□□□□ -0.37
PHGDH-233ENST00000642021 PILRAQ9UKJ1 303 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 ZSCAN5BA6NJL1 495 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 FAM25EA8MYX2 175 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 BRINP1O60477 761 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 PVRP15151 417 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 MAP3K8P41279 467 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 MAGEB1P43366 347 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 EMDP50402 254 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 PRICKLE4Q2TBC4 344 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 TMEM240Q5SV17 173 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 RPL13AP3Q6NVV1 102 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 OR10G6Q8NH81 332 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 ERMAPQ96PL5 475 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-233ENST00000642021 OR14A2Q96R54 314 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 WSB2Q9NYS7 404 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-233ENST00000642021 STMN3Q9NZ72 180 aa12.74□□□□□ -0.37
PHGDH-233ENST00000642021 TRABD2BA6NFA1 517 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 FMO6PO60774 539 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 SLC22A5O76082 557 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 HPXP02790 462 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 ATP1B1P05026 303 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 ANXA3P12429 323 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 HIST1H1CP16403 213 aaKnown RBP12.73□□□□□ -0.37
PHGDH-233ENST00000642021 UGT2B7P16662 529 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 GDI2P50395 445 aaKnown RBP12.73□□□□□ -0.37
PHGDH-233ENST00000642021 CDONQ4KMG0 1287 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 CD276Q5ZPR3 534 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 ENPP7Q6UWV6 458 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 ZNF782Q6ZMW2 699 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-233ENST00000642021 RTL4Q6ZR62 310 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 OR4N2Q8NGD1 307 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 PCNPQ8WW12 178 aaKnown RBP12.73□□□□□ -0.37
PHGDH-233ENST00000642021 DERL3Q96Q80 235 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 IER2Q9BTL4 223 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 ZCCHC4Q9H5U6 513 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 CDCP1Q9H5V8 836 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 TMEM27Q9HBJ8 222 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 B3GNT2Q9NY97 397 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 HEBP2Q9Y5Z4 205 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 TRAV1-2A0A0B4J238 106 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 CYR61O00622 381 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms