RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 RHCEP18577 417 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 PGCP20142 388 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 CNR1P21554 472 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 FASP25445 335 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 MSX1P28360 303 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 ACAA2P42765 397 aaKnown RBP8.51□□□□□ -1.05
PHGDH-228ENST00000641847 IDH2P48735 452 aaKnown RBP8.51□□□□□ -1.05
PHGDH-228ENST00000641847 P2RX1P51575 399 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 GANABQ14697 944 aaKnown RBP8.51□□□□□ -1.05
PHGDH-228ENST00000641847 ATP6AP1Q15904 470 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 ENTPD8Q5MY95 495 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 TIGD3Q6B0B8 471 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 SLC25A25Q6KCM7 469 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 HMBOX1Q6NT76 420 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 GALNTL5Q7Z4T8 443 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 TSPYL5Q86VY4 417 aaPredicted RBP8.51□□□□□ -1.05
PHGDH-228ENST00000641847 SULF2Q8IWU5 870 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 OFCC1Q8IZS5 231 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 LILRA2Q8N149 483 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 PQLC1Q8N2U9 271 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 CADM2Q8N3J6 435 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 OR2M7Q8NG81 312 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 OR1J4Q8NGS1 313 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 ZNF563Q8TA94 476 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 LRTOMTQ8WZ04 291 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 FRMD6Q96NE9 622 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 PKP2Q99959 881 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 FAM173AQ9BQD7 235 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 POLR2J2Q9GZM3 115 aaKnown RBP8.51□□□□□ -1.05
PHGDH-228ENST00000641847 POLR2J3Q9H1A7 115 aaKnown RBP8.51□□□□□ -1.05
PHGDH-228ENST00000641847 DSN1Q9H410 356 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 TMEM27Q9HBJ8 222 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 DEPPQ9NTK1 212 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 TUBA8Q9NY65 449 aaPredicted RBP8.51□□□□□ -1.05
PHGDH-228ENST00000641847 MED11Q9P086 117 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 RHCGQ9UBD6 479 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 TNFRSF10DQ9UBN6 386 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 FBXL2Q9UKC9 423 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 BOKQ9UMX3 212 aaPredicted RBP8.51□□□□□ -1.05
PHGDH-228ENST00000641847 A4GNTQ9UNA3 340 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 KLF13Q9Y2Y9 288 aaPredicted RBP8.51□□□□□ -1.05
PHGDH-228ENST00000641847 TESMINQ9Y4I5 508 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 A0A1B0GWA3 101 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 FAAHO00519 579 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 GNGT2O14610 69 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 FFAR1O14842 300 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 ADAMDEC1O15204 470 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 CLOCKO15516 846 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 PEX1O43933 1283 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 PRSS23O95084 383 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 LINGO3P0C6S8 592 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 MST1P26927 711 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 RRM2P31350 389 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 IFNA8P32881 189 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 MEOX1P50221 254 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 ZNF41P51814 821 aaPredicted RBP8.5□□□□□ -1.05
PHGDH-228ENST00000641847 CDH12P55289 794 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 COPZ1P61923 177 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 FOXD4Q12950 439 aaPredicted RBP8.5□□□□□ -1.05
PHGDH-228ENST00000641847 MYBPHQ13203 477 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 PIN1Q13526 163 aaPredicted RBP8.5□□□□□ -1.05
PHGDH-228ENST00000641847 RIPK1Q13546 671 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 QPRTQ15274 297 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 OR1Q1Q15612 314 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 TOMM34Q15785 309 aaPredicted RBP8.5□□□□□ -1.05
PHGDH-228ENST00000641847 WBP2NLQ6ICG8 309 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 OR2T5Q6IEZ7 315 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 ZNF613Q6PF04 617 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 AMIGO2Q86SJ2 522 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 WDSUB1Q8N9V3 476 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 TMEM178AQ8NBL3 297 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 PIK3C3Q8NEB9 887 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 OR2T29Q8NH02 315 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 ADAMTS16Q8TE57 1224 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 SLC41A3Q96GZ6 507 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 DHRS1Q96LJ7 313 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 FNDC11Q9BVV2 318 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 TRIM2Q9C040 744 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 SEMA6AQ9H2E6 1030 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 PTGES2Q9H7Z7 377 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 DCLRE1BQ9H816 532 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 REEP1Q9H902 201 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 RNPEPL1Q9HAU8 725 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 ZFP64Q9NPA5 681 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 MED17Q9NVC6 651 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 VNN3Q9NY84 501 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 TAS2R10Q9NYW0 307 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 C6orf203Q9P0P8 240 aaPredicted RBP8.5□□□□□ -1.05
PHGDH-228ENST00000641847 RPS6KB2Q9UBS0 482 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 DNAJB9Q9UBS3 223 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 KCNN3Q9UGI6 736 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 RIMS3Q9UJD0 308 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 ACAD8Q9UKU7 415 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 VDAC3Q9Y277 283 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 C15orf41Q9Y2V0 281 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 EML6Q6ZMW3 1958 aa8.5□□□□□ -1.05
PHGDH-228ENST00000641847 PRRC2AP48634 2157 aaKnown RBP8.49□□□□□ -1.05
PHGDH-228ENST00000641847 NINQ8N4C6 2090 aa8.49□□□□□ -1.05
PHGDH-228ENST00000641847 ATRQ13535 2644 aa8.49□□□□□ -1.05
PHGDH-228ENST00000641847 A0A0B4J2E0 115 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms