RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 ZNF440Q8IYI8 595 aa22.38■■□□□ 1.17
VEGFA-230ENST00000640482 DYDC1Q8WWB3 177 aa22.38■■□□□ 1.17
VEGFA-230ENST00000640482 KISS1RQ969F8 398 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-230ENST00000640482 ZNF300Q96RE9 604 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-230ENST00000640482 CCL19Q99731 98 aa22.38■■□□□ 1.17
VEGFA-230ENST00000640482 USB1Q9BQ65 265 aaKnown RBP22.38■■□□□ 1.17
VEGFA-230ENST00000640482 EMC3Q9P0I2 261 aa22.38■■□□□ 1.17
VEGFA-230ENST00000640482 CFAP73A6NFT4 308 aa22.37■■□□□ 1.17
VEGFA-230ENST00000640482 BCHEP06276 602 aa22.37■■□□□ 1.17
VEGFA-230ENST00000640482 MRPL19P49406 292 aaKnown RBP22.37■■□□□ 1.17
VEGFA-230ENST00000640482 ITGADQ13349 1161 aa22.37■■□□□ 1.17
VEGFA-230ENST00000640482 PDK3Q15120 406 aa22.37■■□□□ 1.17
VEGFA-230ENST00000640482 GTDC1Q4AE62 458 aa22.37■■□□□ 1.17
VEGFA-230ENST00000640482 LIN52Q52LA3 116 aa22.37■■□□□ 1.17
VEGFA-230ENST00000640482 ABLIM2Q6H8Q1 611 aa22.37■■□□□ 1.17
VEGFA-230ENST00000640482 Q6ZT83 130 aa22.37■■□□□ 1.17
VEGFA-230ENST00000640482 GALNT5Q7Z7M9 940 aa22.37■■□□□ 1.17
VEGFA-230ENST00000640482 GOLGA6L1Q8N7Z2 621 aa22.37■■□□□ 1.17
VEGFA-230ENST00000640482 DDIT4LQ96D03 193 aa22.37■■□□□ 1.17
VEGFA-230ENST00000640482 PLPPR2Q96GM1 343 aa22.37■■□□□ 1.17
VEGFA-230ENST00000640482 CACYBPQ9HB71 228 aaKnown RBP22.37■■□□□ 1.17
VEGFA-230ENST00000640482 SLCO1B3Q9NPD5 702 aa22.37■■□□□ 1.17
VEGFA-230ENST00000640482 TMED7-TICAM2A0A0A6YYA0 188 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 ZNF814B7Z6K7 855 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 SMPD2O60906 423 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 CCNA2P20248 432 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 HOXC12P31275 282 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 SLC1A3P43003 542 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 MAP2K6P52564 334 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 NKX6-1P78426 367 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-230ENST00000640482 EPS8Q12929 822 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 MAPK11Q15759 364 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 TTMPQ5BVD1 217 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 SHEQ5VZ18 495 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 ZNF704Q6ZNC4 412 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-230ENST00000640482 OR52P1PQ8NH57 321 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 PIGXQ8TBF5 258 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 SLC38A5Q8WUX1 472 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 HSD17B8Q92506 261 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 GTF2H4Q92759 462 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 ZNF775Q96BV0 537 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-230ENST00000640482 AURKBQ96GD4 344 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-230ENST00000640482 ARL5BQ96KC2 179 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 OR11A1Q9GZK7 315 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 RAD21L1Q9H4I0 556 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 NGBQ9NPG2 151 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 OSGIN1Q9UJX0 560 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 PRDM4Q9UKN5 801 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 TMED7Q9Y3B3 224 aa22.36■■□□□ 1.17
VEGFA-230ENST00000640482 DSPPQ9NZW4 1301 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 ZNF469Q96JG9 3925 aaPredicted RBP22.35■■□□□ 1.17
VEGFA-230ENST00000640482 IGKV3D-15A0A087WSY6 115 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 ARHGEF9O43307 516 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 ZNF208O43345 1280 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 TFPTP0C1Z6 253 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 TACR3P29371 465 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 OR2B6P58173 313 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 TSC22D1Q15714 1073 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 ZSWIM7Q19AV6 140 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 ALKBH2Q6NS38 261 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 ZNF100Q8IYN0 542 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 LRRC75A-AS1Q8N1F1 130 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 WFDC11Q8NEX6 87 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 CCDC28BQ9BUN5 200 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 TMEM181Q9P2C4 612 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 PRSS50Q9UI38 385 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 TRAPPC4Q9Y296 219 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 PCDHB14Q9Y5E9 798 aa22.35■■□□□ 1.17
VEGFA-230ENST00000640482 CDHR4A6H8M9 788 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 CNOT4O95628 575 aaKnown RBP22.34■■□□□ 1.17
VEGFA-230ENST00000640482 FOSL1P15407 271 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 IDH3AP50213 366 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 LARS2Q15031 903 aaKnown RBP22.34■■□□□ 1.17
VEGFA-230ENST00000640482 SLC2A7Q6PXP3 512 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 BHLHA15Q7RTS1 189 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-230ENST00000640482 VRK2Q86Y07 508 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 P3H2Q8IVL5 708 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 DNAJA3Q96EY1 480 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 TMEM19Q96HH6 336 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 POTEKPQ9BYX7 375 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 PAIP1Q9H074 479 aaKnown RBP22.34■■□□□ 1.17
VEGFA-230ENST00000640482 ARMC7Q9H6L4 198 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 RLIMQ9NVW2 624 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 ZNF232Q9UNY5 417 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 ZNF443Q9Y2A4 671 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-230ENST00000640482 ITPR3Q14573 2671 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 VPS13CQ709C8 3753 aa22.34■■□□□ 1.17
VEGFA-230ENST00000640482 A0A0G2JPF8 293 aa22.33■■□□□ 1.17
VEGFA-230ENST00000640482 TMEM72A0PK05 275 aa22.33■■□□□ 1.17
VEGFA-230ENST00000640482 HNRNPCL2B2RXH8 293 aa22.33■■□□□ 1.17
VEGFA-230ENST00000640482 HNRNPCL3B7ZW38 293 aa22.33■■□□□ 1.17
VEGFA-230ENST00000640482 GPR171O14626 319 aa22.33■■□□□ 1.17
VEGFA-230ENST00000640482 HNRNPCL1O60812 293 aaKnown RBP22.33■■□□□ 1.17
VEGFA-230ENST00000640482 THBS1P07996 1170 aa22.33■■□□□ 1.17
VEGFA-230ENST00000640482 HNRNPCL4P0DMR1 293 aa22.33■■□□□ 1.17
VEGFA-230ENST00000640482 FADDQ13158 208 aa22.33■■□□□ 1.17
VEGFA-230ENST00000640482 RNF220Q5VTB9 566 aa22.33■■□□□ 1.17
VEGFA-230ENST00000640482 ZNF836Q6ZNA1 936 aa22.33■■□□□ 1.17
VEGFA-230ENST00000640482 HDXQ7Z353 690 aa22.33■■□□□ 1.17
VEGFA-230ENST00000640482 EBF4Q9BQW3 602 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms