RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 NIPAL2Q9H841 368 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 SLC35A3Q9Y2D2 325 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 ADH1BP00325 375 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 ADRB1P08588 477 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 HIST1H1CP16403 213 aaKnown RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 THBS2P35442 1172 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 GDI2P50395 445 aaKnown RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 EMDP50402 254 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 PGDP52209 483 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 POU6F2P78424 691 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 SNTB2Q13425 540 aaKnown RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 POU4F3Q15319 338 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 TMEM240Q5SV17 173 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 METTL27Q8N6F8 245 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 OR52R1Q8NGF1 315 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 BRIX1Q8TDN6 353 aaKnown RBP13.48□□□□□ -0.25
SCARB2-221ENST00000640341 FAM3CQ92520 227 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 OR51J1Q9H342 316 aa13.48□□□□□ -0.25
SCARB2-221ENST00000640341 FLRT2O43155 660 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 AGR2O95994 175 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 UGT2B7P16662 529 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 ADPRHP54922 357 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 GPR18Q14330 331 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 OR11H4Q8NGC9 324 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 GIMAP1Q8WWP7 306 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 OR2A5Q96R48 311 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 NMNAT3Q96T66 252 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 ZNF350Q9GZX5 532 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 FOLH1BQ9HBA9 442 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 A0A087WV48 116 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 C4orf47A7E2U8 309 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 RDH16O75452 317 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 CTSBP07858 339 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 NGFRP08138 427 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 HK1P19367 917 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 NPR2P20594 1047 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 SOX2P48431 317 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 P2RX3P56373 397 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 HYAL4Q2M3T9 481 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 FAM209AQ5JX71 171 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 DGAT2L6Q6ZPD8 337 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-221ENST00000640341 LGALS14Q8TCE9 139 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 SERINC2Q96SA4 455 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 GTPBP2Q9BX10 602 aaKnown RBP13.47□□□□□ -0.25
SCARB2-221ENST00000640341 RPS6KB2Q9UBS0 482 aa13.47□□□□□ -0.25
SCARB2-221ENST00000640341 ZNF223Q9UK11 482 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-221ENST00000640341 TP53BP1Q12888 1972 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-221ENST00000640341 SELENOFO60613 162 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 ANKRD34CP0C6C1 535 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 RBMS1P29558 406 aaKnown RBP13.46□□□□□ -0.25
SCARB2-221ENST00000640341 ARPC4P59998 168 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 PLA1AQ53H76 456 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 PYHIN1Q6K0P9 492 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 NUDT18Q6ZVK8 323 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 GPALPP1Q8IXQ4 340 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 UXS1Q8NBZ7 420 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 SUN5Q8TC36 379 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 CRISPLD2Q9H0B8 497 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 KIR3DX1Q9H7L2 352 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 FLRT3Q9NZU0 649 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 SPACA6W5XKT8 324 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 KIF26AQ9ULI4 1882 aaPredicted RBP13.46□□□□□ -0.25
SCARB2-221ENST00000640341 NUP210Q8TEM1 1887 aaPredicted RBP13.46□□□□□ -0.25
SCARB2-221ENST00000640341 BLOC1S5-TXNDC5H3BN57 136 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 HRKO00198 91 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 BTCP35070 178 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 C1orf53Q5VUE5 145 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 TIGD3Q6B0B8 471 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 POMZP3Q6PJE2 187 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 PARM1Q6UWI2 310 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 UBE2Q1Q7Z7E8 422 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 ZNF687Q8N1G0 1237 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 OR8K3Q8NH51 312 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 FGF14Q92915 247 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 TSSK2Q96PF2 358 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 OR10A4Q9H209 315 aa13.46□□□□□ -0.25
SCARB2-221ENST00000640341 URADA6NGE7 173 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 J3QRE1 110 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 HCRTR1O43613 425 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 ICMTO60725 284 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 TFP02787 698 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 RPS27P42677 84 aaKnown RBP13.46□□□□□ -0.26
SCARB2-221ENST00000640341 ACSM1Q08AH1 577 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 TNK1Q13470 666 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 ABHD13Q7L211 337 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 C9orf62Q8N4C0 152 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 CDRT4Q8N9R6 151 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 CCDC120Q96HB5 630 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 HSPA12BQ96MM6 686 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 C1QTNF7Q9BXJ2 289 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 HRASLS2Q9NWW9 162 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 ACTR10Q9NZ32 417 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 SPATA2Q9UM82 520 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 C19orf53Q9UNZ5 99 aaPredicted RBP13.46□□□□□ -0.26
SCARB2-221ENST00000640341 RCE1Q9Y256 329 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 SLC22A7Q9Y694 548 aa13.46□□□□□ -0.26
SCARB2-221ENST00000640341 GPR89AB7ZAQ6 455 aa13.45□□□□□ -0.26
SCARB2-221ENST00000640341 PLPP2O43688 288 aa13.45□□□□□ -0.26
SCARB2-221ENST00000640341 CRYZL1O95825 349 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms