RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 YAP1P46937 504 aaKnown RBP11.86□□□□□ -0.51
GTF3A-209ENST00000640289 EIF1AXP47813 144 aaKnown RBP11.86□□□□□ -0.51
GTF3A-209ENST00000640289 RASSF2P50749 326 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 CDH12P55289 794 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 SRSF1Q07955 248 aaKnown RBP eCLIP11.86□□□□□ -0.51
GTF3A-209ENST00000640289 IFI44LQ53G44 452 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 SYT14P1Q58G82 188 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 ALG10BQ5I7T1 473 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 HBMQ6B0K9 141 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 B3GNT6Q6ZMB0 384 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 ESPNLQ6ZVH7 1005 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 SEM1Q6ZVN7 128 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 ADGRE4PQ86SQ3 457 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 OR10D3Q8NH80 312 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 OR2V1Q8NHB1 315 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 RNF217Q8TC41 542 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 ARL5BQ96KC2 179 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 OR5B2Q96R09 309 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 DMRTA2Q96SC8 542 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 VKORC1Q9BQB6 163 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 TTYH2Q9BSA4 534 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 AMBRA1Q9C0C7 1298 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 ACTR3BQ9P1U1 418 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 STOML1Q9UBI4 398 aa11.86□□□□□ -0.51
GTF3A-209ENST00000640289 SAMD4AQ9UPU9 718 aaKnown RBP11.86□□□□□ -0.51
GTF3A-209ENST00000640289 A0A1B0GUH1 482 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 ELOA3DA6NLF2 546 aaPredicted RBP11.85□□□□□ -0.51
GTF3A-209ENST00000640289 GJE1A6NN92 205 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 J3KTA2 159 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 ADAMDEC1O15204 470 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 SLC7A1P30825 629 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 PTGER4P35408 488 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 NUP107P57740 925 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 RPS3AP61247 264 aaKnown RBP11.85□□□□□ -0.51
GTF3A-209ENST00000640289 PMPCAQ10713 525 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 PIN1Q13526 163 aaPredicted RBP11.85□□□□□ -0.51
GTF3A-209ENST00000640289 SGCBQ16585 318 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 ELOA3BQ3SY89 546 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 NSUN5P2Q63ZY6 315 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 LCN8Q6JVE9 175 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 PPP4R4Q6NUP7 873 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 ULK3Q6PHR2 472 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 CHMP1BQ7LBR1 199 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 TSEN54Q7Z6J9 526 aaKnown RBP11.85□□□□□ -0.51
GTF3A-209ENST00000640289 DHFR2Q86XF0 187 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 EID3Q8N140 333 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 ELOA3Q8NG57 546 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 ADAMTS16Q8TE57 1224 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 SLC25A43Q8WUT9 341 aaPredicted RBP11.85□□□□□ -0.51
GTF3A-209ENST00000640289 GEMIN6Q8WXD5 167 aaKnown RBP11.85□□□□□ -0.51
GTF3A-209ENST00000640289 OSTF1Q92882 214 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 MCUR1Q96AQ8 359 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 ASB9Q96DX5 294 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 CCDC120Q96HB5 630 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 SRXN1Q9BYN0 137 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 LRMDAQ9H2I8 198 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 MUC13Q9H3R2 512 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 CLCF1Q9UBD9 225 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 PRDM4Q9UKN5 801 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 SLC7A7Q9UM01 511 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 SLC5A6Q9Y289 635 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 SPIN1Q9Y657 262 aaPredicted RBP11.85□□□□□ -0.51
GTF3A-209ENST00000640289 HEATR5AQ86XA9 2040 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 MED12Q93074 2177 aa11.85□□□□□ -0.51
GTF3A-209ENST00000640289 SVILO95425 2214 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 FREM3P0C091 2139 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 TCRBV5S2A0A599 114 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 ACOT8O14734 319 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 ZNF208O43345 1280 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 TOXO94900 526 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 LYPD3O95274 346 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 TGM6O95932 706 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 SEMG1P04279 462 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 IFNW1P05000 195 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 HOXD4P09016 255 aaPredicted RBP11.84□□□□□ -0.51
GTF3A-209ENST00000640289 GLI4P10075 376 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 FUT4P22083 530 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 CARD18P57730 90 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 ADORA2A-AS1P86434 159 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 KCNC4Q03721 635 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 EGR4Q05215 589 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 FOXD4Q12950 439 aaPredicted RBP11.84□□□□□ -0.51
GTF3A-209ENST00000640289 MYBPHQ13203 477 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 PON3Q15166 354 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 PDSS1Q5T2R2 415 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 ZNF613Q6PF04 617 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 WDR88Q6ZMY6 472 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 TMPPEQ6ZT21 453 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 P3H2Q8IVL5 708 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 C9orf106Q8NAJ2 232 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 FNDC9Q8TBE3 224 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 DNAJA4Q8WW22 397 aaPredicted RBP11.84□□□□□ -0.51
GTF3A-209ENST00000640289 SLC38A4Q969I6 547 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 DDIT4LQ96D03 193 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 SLC47A1Q96FL8 570 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 SLC41A3Q96GZ6 507 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 PYURFQ96I23 114 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 CALHM2Q9HA72 323 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 C12orf10Q9HB07 376 aa11.84□□□□□ -0.51
GTF3A-209ENST00000640289 SELENONQ9NZV5 590 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms