RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 NELFCDQ8IXH7 590 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 ZNF101Q8IZC7 436 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 C17orf47Q8NEP4 570 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 OR10G3Q8NGC4 313 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 OR51D1Q8NGF3 324 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 OR10S1Q8NGN2 331 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 GIMAP1Q8WWP7 306 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 RAB1CQ92928 201 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 RAD51AP1Q96B01 352 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 REXO5Q96IC2 774 aaKnown RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 TRIB3Q96RU7 358 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 LLPHQ9BRT6 129 aaKnown RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 DPH7Q9BTV6 452 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 CCDC106Q9BWC9 280 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 NPLQ9BXD5 320 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 TOR3AQ9H497 397 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 SCPEP1Q9HB40 452 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 DYNLRB1Q9NP97 96 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 POLE3Q9NRF9 147 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 INPP5EQ9NRR6 644 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 CA10Q9NS85 328 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 PPP4R1LQ9P1A2 415 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 DUX4Q9UBX2 424 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 CLEC4AQ9UMR7 237 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 SHOC2Q9UQ13 582 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 AURKCQ9UQB9 309 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 PKD1P98161 4303 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 LOC100509620A0A075B734 347 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 TEX13CA0A0J9YWL9 993 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 TCRBV7S2A1N4TA0A589 114 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 SGK494L7N484 410 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 UBXN8O00124 270 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 P2RY10O00398 339 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 CASQ2O14958 399 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 RIPK2O43353 540 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 RDH16O75452 317 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 HAUS5O94927 633 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 FERP16591 822 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 PRKCAP17252 672 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 GABRB1P18505 474 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 CCNA2P20248 432 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 ADMP35318 185 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 ARL4AP40617 200 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 ACAA2P42765 397 aaKnown RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 MFAP4P55083 255 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 GSCP56915 257 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 PSPHP78330 225 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 SLC3A1Q07837 685 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 NPRL3Q12980 569 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 GRB7Q14451 532 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 IQCB1Q15051 598 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 VMACQ2NL98 169 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 PTPN20Q4JDL3 420 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 ANKRD20A4Q4UJ75 823 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 DCAF17Q5H9S7 520 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 ANKRD20A2Q5SQ80 823 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 ANKRD20A1Q5TYW2 823 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 GKAP1Q5VSY0 366 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 ANKRD20A3Q5VUR7 823 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 DRICH1Q6PGQ1 229 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 MFSD7Q6UXD7 560 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 TMEM64Q6YI46 380 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 RBPMS2Q6ZRY4 209 aaKnown RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 PHLDB2Q86SQ0 1253 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 ATG4DQ86TL0 474 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 PDZD9Q8IXQ8 264 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 ZNF595Q8IYB9 648 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 Q8N2B8 174 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 PSMA8Q8TAA3 256 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 FNDC9Q8TBE3 224 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 ARRDC2Q8TBH0 407 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 NSMAFQ92636 917 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 CORO2AQ92828 525 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 PDLIM2Q96JY6 352 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 DNAJC1Q96KC8 554 aaKnown RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 OSBPL9Q96SU4 736 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 TXN2Q99757 166 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 FERMT1Q9BQL6 677 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 TRIM15Q9C019 465 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 SLC5A7Q9GZV3 580 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 MRPS30Q9NP92 439 aaKnown RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 CTNNAL1Q9UBT7 734 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 SLC23A1Q9UHI7 598 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 ZNF346Q9UL40 294 aaKnown RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 SLC45A2Q9UMX9 530 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 MRPS33Q9Y291 106 aaKnown RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 ZNF256Q9Y2P7 627 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 CAB39Q9Y376 341 aaPredicted RBP2.88□□□□□ -1.95
CCDC7-213ENST00000639290 CLCA3PQ9Y6N3 262 aa2.88□□□□□ -1.95
CCDC7-213ENST00000639290 APOBP04114 4563 aaKnown RBP2.87□□□□□ -1.95
CCDC7-213ENST00000639290 GXYLT2A0PJZ3 443 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 ZNF814B7Z6K7 855 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 PRR23D1E9PI22 279 aaPredicted RBP2.87□□□□□ -1.95
CCDC7-213ENST00000639290 hCG_2039718K7EN88 272 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 AP3B1O00203 1094 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 DFFAO00273 331 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 CHST10O43529 356 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 PEX11AO75192 247 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 SYNGR4O95473 234 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 OTCP00480 354 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms