RNA–Protein interactions for RNA: ENST00000639247.1

CNTNAP2-225, Transcript of contactin associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP2, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-225ENST00000639247 PCDHGB6Q9Y5F9 930 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 NPIPA5E9PKD4 350 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 FAAHO00519 579 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 TFECO14948 347 aaPredicted RBP13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 E2F6O75461 281 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 POU2F1P14859 743 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 SFTPDP35247 375 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 LIMS1P48059 325 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 ST3GAL3Q11203 375 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 C3AR1Q16581 482 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 GRINAQ7Z429 371 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 TEX19Q8NA77 164 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 KTI12Q96EK9 354 aaPredicted RBP13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 DHRS1Q96LJ7 313 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 FUZQ9BT04 418 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 DCLRE1BQ9H816 532 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 REEP1Q9H902 201 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 RNPEPL1Q9HAU8 725 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 NPIPA1Q9UND3 350 aa13.12□□□□□ -0.31
CNTNAP2-225ENST00000639247 A0A087WUJ7 227 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 A0A1W2PRQ8 180 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 ELOA3DA6NLF2 546 aaPredicted RBP13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 CDK2AP1O14519 115 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 CHP2O43745 196 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 SUSD5O60279 629 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 DEAF1O75398 565 aaPredicted RBP13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 UQCRBP14927 111 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 DGCR6Q14129 220 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 TMEM44Q2T9K0 475 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 ELOA3BQ3SY89 546 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 OTUD3Q5T2D3 398 aaPredicted RBP13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 TRILQ7L0X0 811 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 SLC22A16Q86VW1 577 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 EGFL6Q8IUX8 553 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 NRMQ8IXM6 262 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 ELOA3Q8NG57 546 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 NRG4Q8WWG1 115 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 ST8SIA1Q92185 356 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 PNPLA2Q96AD5 504 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 GPA33Q99795 319 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 ADNPQ9H2P0 1102 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 RYDENQ9NUL5 291 aaKnown RBP13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 TUBD1Q9UJT1 453 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 ALPK2Q86TB3 2170 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 CFAP46Q8IYW2 2715 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 A0A1W2PNR3 127 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 ZNF23P17027 643 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 CXCR1P25024 350 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 POLR2HP52434 150 aaKnown RBP13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 CLDN20P56880 219 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 GTF3C1Q12789 2109 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 SLC10A1Q14973 349 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 TRAM2Q15035 370 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 HYAL4Q2M3T9 481 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 LINC00114Q6XXX2 140 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 PRICKLE2Q7Z3G6 844 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 UBQLNLQ8IYU4 475 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 GTPBP8Q8N3Z3 284 aaPredicted RBP13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 TMEM234Q8WY98 164 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 CENPNQ96H22 339 aaPredicted RBP13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 ZDHHC11Q9H8X9 412 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 SMURF2Q9HAU4 748 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 STX18Q9P2W9 335 aaKnown RBP13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 B4GALT7Q9UBV7 327 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 SEC14L4Q9UDX3 406 aa13.11□□□□□ -0.31
CNTNAP2-225ENST00000639247 ZGRF1Q86YA3 2104 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 ADAMDEC1O15204 470 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 HPNP05981 417 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 KLK2P20151 261 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 PEX2P28328 305 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 GPR4P46093 362 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 RPS5P46782 204 aaKnown RBP13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 GFRA1P56159 465 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 GXYLT1Q4G148 440 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 ZNF730Q6ZMV8 503 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 FAM109AQ8N4B1 249 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 LRRC17Q8N6Y2 441 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 OR4K5Q8NGD3 323 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 DNAJA4Q8WW22 397 aaPredicted RBP13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 TMEM239Q8WW34 195 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 MRGPRX4Q96LA9 322 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 SFXN2Q96NB2 322 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 SLC29A1Q99808 456 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 OR2B2Q9GZK3 357 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 PDP1Q9P0J1 537 aaPredicted RBP13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 SPRR3Q9UBC9 169 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 CHRNA9Q9UGM1 479 aa13.1□□□□□ -0.31
CNTNAP2-225ENST00000639247 SH3PXD2BA1X283 911 aa13.09□□□□□ -0.31
CNTNAP2-225ENST00000639247 ERVH48-1M5A8F1 160 aa13.09□□□□□ -0.31
CNTNAP2-225ENST00000639247 ACOT7O00154 380 aa13.09□□□□□ -0.31
CNTNAP2-225ENST00000639247 ETV2O00321 342 aaPredicted RBP13.09□□□□□ -0.31
CNTNAP2-225ENST00000639247 SEC14L5O43304 696 aa13.09□□□□□ -0.31
CNTNAP2-225ENST00000639247 HMGA2P52926 109 aa13.09□□□□□ -0.31
CNTNAP2-225ENST00000639247 SUCLG1P53597 346 aaKnown RBP13.09□□□□□ -0.31
CNTNAP2-225ENST00000639247 MLLT10P55197 1068 aa13.09□□□□□ -0.31
CNTNAP2-225ENST00000639247 CLDN15P56746 228 aa13.09□□□□□ -0.31
CNTNAP2-225ENST00000639247 ALDH6A1Q02252 535 aaKnown RBP13.09□□□□□ -0.31
CNTNAP2-225ENST00000639247 SRYQ05066 204 aa13.09□□□□□ -0.31
CNTNAP2-225ENST00000639247 TRIP10Q15642 601 aa13.09□□□□□ -0.31
CNTNAP2-225ENST00000639247 TMEM176BQ3YBM2 270 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms