RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 SLC2A12Q8TD20 617 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 ELP5Q8TE02 316 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 TRIM63Q969Q1 353 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 METTL8Q9H825 291 aaKnown RBP12.62□□□□□ -0.39
SCARB2-215ENST00000639145 MED20Q9H944 212 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 PCDHGA6Q9Y5G7 932 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 PMF1-BGLAPU3KQ54 211 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 DLGAP1O14490 977 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 ARHGAP33O14559 1287 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 DENRO43583 198 aaKnown RBP12.62□□□□□ -0.39
SCARB2-215ENST00000639145 RAD51DO75771 328 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 CELA2BP08218 269 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-215ENST00000639145 SBK3P0C264 359 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 BCKDHBP21953 392 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 C21orf33P30042 268 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-215ENST00000639145 RGS6P49758 472 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 CLDN17P56750 224 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 TUBA3EQ6PEY2 450 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 PRSS48Q7RTY5 328 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 RBM45Q8IUH3 476 aaKnown RBP12.62□□□□□ -0.39
SCARB2-215ENST00000639145 OR4F15Q8NGB8 312 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 OR5M1Q8NGP8 315 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 HAVCR1Q96D42 359 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 TSPAN10Q9H1Z9 355 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-215ENST00000639145 CALHM2Q9HA72 323 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 ZNF221Q9UK13 617 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 CNOT11Q9UKZ1 510 aaKnown RBP12.62□□□□□ -0.39
SCARB2-215ENST00000639145 SH2B3Q9UQQ2 575 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 CMAHPQ9Y471 501 aa12.62□□□□□ -0.39
SCARB2-215ENST00000639145 PHYHO14832 338 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 FCMRO60667 390 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 CSO75390 466 aaKnown RBP12.61□□□□□ -0.39
SCARB2-215ENST00000639145 APLNRP35414 380 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 FASLGP48023 281 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 CD97P48960 835 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 RUNX2Q13950 521 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 SLC35F3Q8IY50 421 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 ZNF578Q96N58 590 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-215ENST00000639145 SLC6A20Q9NP91 592 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 SIDT1Q9NXL6 827 aaKnown RBP12.61□□□□□ -0.39
SCARB2-215ENST00000639145 PCDHGB6Q9Y5F9 930 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 LTBP1Q14766 1721 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 MTRF1O75570 445 aaKnown RBP12.61□□□□□ -0.39
SCARB2-215ENST00000639145 CHMP24386 653 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 MAGEA2P43356 314 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 WNT4P56705 351 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 EXT1Q16394 746 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 ZNF322Q6U7Q0 402 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-215ENST00000639145 LRRC18Q8N456 261 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 NRG4Q8WWG1 115 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 NECAB3Q96P71 396 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-215ENST00000639145 TRPV4Q9HBA0 871 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 EMC3Q9P0I2 261 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 A0A0X1KG70 313 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 PRAMEF25A6NGN4 478 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 CD3GP09693 182 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 IL32P24001 234 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 GRK5P34947 590 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 THBS2P35442 1172 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 TSPAN31Q12999 210 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 ZNF613Q6PF04 617 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 SLC35D2Q76EJ3 337 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 DEFB124Q8NES8 71 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 CCDC120Q96HB5 630 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 ZNF845Q96IR2 970 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-215ENST00000639145 ANKRD60Q9BZ19 345 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 FN3KQ9H479 309 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 UCKL1Q9NWZ5 548 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 C19orf53Q9UNZ5 99 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-215ENST00000639145 POLHQ9Y253 713 aa12.61□□□□□ -0.39
SCARB2-215ENST00000639145 TMEM221A6NGB7 291 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 KLRC4-KLRK1H3BQV0 150 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 M0R296 226 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 POLR2HP52434 150 aaKnown RBP12.6□□□□□ -0.39
SCARB2-215ENST00000639145 GLYR1Q49A26 553 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-215ENST00000639145 FAM205BPQ63HN1 556 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 GPR139Q6DWJ6 353 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 ABHD12BQ7Z5M8 362 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-215ENST00000639145 OR9K2Q8NGE7 335 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 GABRG3Q99928 467 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 PPIL1Q9Y3C6 166 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 EEF1E1-BLOC1S5C9J1V9 151 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 EEF1E1O43324 174 aaKnown RBP12.6□□□□□ -0.39
SCARB2-215ENST00000639145 RBBP9O75884 186 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 CD22P20273 847 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 GCH1P30793 250 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 TPTEP56180 551 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 RAB15P59190 212 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 IHHQ14623 411 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 TRAM1Q15629 374 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 HES5Q5TA89 166 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 PLAG1Q6DJT9 500 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 NIPAL3Q6P499 406 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 YRDCQ86U90 279 aaKnown RBP12.6□□□□□ -0.39
SCARB2-215ENST00000639145 OR7G1Q8NGA0 311 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 TMEM255BQ8WV15 326 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 SDF2Q99470 211 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 SMURF1Q9HCE7 757 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 C13orf42A0A1B0GVH6 325 aa12.6□□□□□ -0.39
SCARB2-215ENST00000639145 EPOPA6NHQ4 379 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms